Examples of OWLAnnotation

org.semanticweb.owl.model.OWLAnnotation
Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 18-Dec-2006

Annotations are used in the various types of annotation axioms, which bind annotations to their subjects (i.e. axioms or declarations). An annotation is equal to another annotation if both objects have equal annotation URIs and have equal annotation values
org.semanticweb.owlapi.model.OWLAnnotation
Annotations are used in the various types of annotation axioms, which bind annotations to their subjects (i.e. axioms or declarations).
An annotation is equal to another annotation if both objects have equal annotation URIs and have equal annotation values. @author Matthew Horridge, The University Of Manchester, Bio-HealthInformatics Group @since 2.0.0

Examples of org.semanticweb.owlapi.model.OWLAnnotation

        ont1.getOWLOntologyManager().applyChange(
                new AddImport(ont2, ont2import));
        OWLAnnotationProperty annoProp = AnnotationProperty(iri("annoProp"));
        OWLAxiom axannoPropdecl = Declaration(annoProp);
        ont1.getOWLOntologyManager().addAxiom(ont1, axannoPropdecl);
        OWLAnnotation inont1anno = Annotation(annoProp, ont1iri);
        OWLAnnotation inont2anno = Annotation(annoProp, ont2iri);
        OWLClass a = Class(iri("A"));
        OWLAxiom axAdecl = Declaration(a, singleton(inont1anno));
        ont1.getOWLOntologyManager().addAxiom(ont1, axAdecl);
        OWLClass b = Class(iri("B"));
        OWLAxiom axBdecl = Declaration(b, singleton(inont2anno));

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

        ont2.getOWLOntologyManager().applyChange(
                new AddImport(ont2, ont2import));
        OWLAnnotationProperty annoProp = AnnotationProperty(iri("annoProp"));
        OWLAxiom axAnnoPropDecl = Declaration(annoProp);
        ont1.getOWLOntologyManager().addAxiom(ont1, axAnnoPropDecl);
        OWLAnnotation inOnt1Anno = Annotation(annoProp, ont1iri);
        OWLAnnotation inOnt2Anno = Annotation(annoProp, ont2iri);
        OWLClass a = Class(iri("A"));
        OWLAxiom axADecl = Declaration(a, singleton(inOnt1Anno));
        ont1.getOWLOntologyManager().addAxiom(ont1, axADecl);
        OWLClass b = Class(iri("B"));
        OWLAxiom axBDecl = Declaration(b, singleton(inOnt2Anno));

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

        SWRLVariable x = df.getSWRLVariable(IRI(NS + "#x"));
        SWRLAtom atom1 = df.getSWRLClassAtom(a, x);
        SWRLAtom atom2 = df.getSWRLClassAtom(b, x);
        Set<SWRLAtom> consequent = new TreeSet<>();
        consequent.add(atom1);
        OWLAnnotation annotation = df.getOWLAnnotation(RDFSComment(),
                Literal("Not a great rule"));
        Set<OWLAnnotation> annotations = new TreeSet<>();
        annotations.add(annotation);
        Set<SWRLAtom> body = new TreeSet<>();
        body.add(atom2);

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

    public void testPositiveUTF8roundTrip() throws Exception {
        String ns = "http://protege.org/UTF8.owl";
        OWLOntology ontology = m.createOntology(IRI(ns));
        OWLClass a = Class(IRI(ns + "#A"));
        m.addAxiom(ontology, df.getOWLDeclarationAxiom(a));
        OWLAnnotation ann = df.getOWLAnnotation(df.getRDFSLabel(),
                df.getOWLLiteral("Chinese=處方"));
        OWLAxiom axiom = df.getOWLAnnotationAssertionAxiom(a.getIRI(), ann);
        m.addAxiom(ontology, axiom);
        ontology = roundTrip(ontology, new FunctionalSyntaxDocumentFormat());
    }

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

        OWLAnonymousIndividual h = AnonymousIndividual();
        OWLAnonymousIndividual i = AnonymousIndividual();
        OWLAnnotationProperty p = AnnotationProperty(IRI(ns + "#p"));
        OWLObjectProperty q = ObjectProperty(IRI(ns + "#q"));
        OWLOntology ontology = m.createOntology(IRI(ns));
        OWLAnnotation annotation1 = df.getOWLAnnotation(p, h);
        m.addAxiom(ontology,
                df.getOWLAnnotationAssertionAxiom(a.getIRI(), annotation1));
        m.addAxiom(ontology, ClassAssertion(a, h));
        m.addAxiom(ontology, ObjectPropertyAssertion(q, h, i));
        OWLAnnotation annotation2 = df.getOWLAnnotation(df.getRDFSLabel(),
                Literal("Second", "en"));
        m.addAxiom(ontology, df.getOWLAnnotationAssertionAxiom(h, annotation2));
        roundTrip(ontology, new ManchesterSyntaxDocumentFormat());
    }

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

    protected OWLOntology createOntology() {
        try {
            OWLOntology ont = m.createOntology();
            OWLAnnotationProperty prop = AnnotationProperty(IRI("http://www.semanticweb.org/ontologies/test/annotationont#prop"));
            OWLLiteral value = Literal(33);
            OWLAnnotation annotation = df.getOWLAnnotation(prop, value);
            ont.getOWLOntologyManager().applyChange(
                    new AddOntologyAnnotation(ont, annotation));
            ont.getOWLOntologyManager().addAxiom(ont, Declaration(prop));
            return ont;
        } catch (OWLOntologyCreationException e) {

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Examples of org.semanticweb.owlapi.model.OWLAnnotation

                .getIRI());
        Set<OWLAnnotation> toReturn = new HashSet<>();
        for (OWLAnnotation a : anns) {
            Optional<OWLLiteral> asLiteral = a.getValue().asLiteral();
            if (asLiteral.isPresent() && asLiteral.get().isRDFPlainLiteral()) {
                OWLAnnotation replacement = df.getOWLAnnotation(
                        a.getProperty(), df.getOWLLiteral(asLiteral.get()
                                .getLiteral(), stringType));
                toReturn.add(replacement);
            } else {
                toReturn.add(a);

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Examples of org.semanticweb.owlapi.model.OWLAnnotation


    @Test
    public void testGetAxiomsIgnoringAnnoations() {
        OWLLiteral annoLiteral = Literal("value");
        OWLAnnotationProperty annoProp = AnnotationProperty(iri("annoProp"));
        OWLAnnotation anno = df.getOWLAnnotation(annoProp, annoLiteral);
        OWLAxiom axiom = df.getOWLSubClassOfAxiom(Class(iri("A")),
                Class(iri("B")), singleton(anno));
        OWLOntology ont = getOWLOntology("testont");
        ont.getOWLOntologyManager().addAxiom(ont, axiom);
        assertTrue(ont.getAxiomsIgnoreAnnotations(axiom, EXCLUDED).contains(

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Examples of org.semanticweb.owlapi.model.OWLAnnotation


    @Test
    public void testContainsReferenceForAxiomAnnotation() {
        OWLAnnotationProperty ap = AnnotationProperty(iri("prop"));
        OWLLiteral val = Literal("Test", "");
        OWLAnnotation anno = df.getOWLAnnotation(ap, val);
        OWLSubClassOfAxiom ax = df.getOWLSubClassOfAxiom(Class(iri("A")),
                Class(iri("B")), singleton(anno));
        OWLOntology ont = getOWLOntology("Ont");
        ont.getOWLOntologyManager().addAxiom(ont, ax);
        assertTrue(ont.containsAnnotationPropertyInSignature(anno.getProperty()
                .getIRI(), EXCLUDED));
        assertTrue(ont.getAnnotationPropertiesInSignature(EXCLUDED).contains(
                anno.getProperty()));
    }

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Examples of org.semanticweb.owlapi.model.OWLAnnotation


    @Test
    public void testContainsReferenceForOntologyAnnotation() {
        OWLAnnotationProperty ap = AnnotationProperty(iri("prop"));
        OWLLiteral val = Literal("Test");
        OWLAnnotation anno = df.getOWLAnnotation(ap, val);
        OWLOntology ont = getOWLOntology("Ont");
        ont.getOWLOntologyManager().applyChange(
                new AddOntologyAnnotation(ont, anno));
        assertTrue(ont.containsAnnotationPropertyInSignature(anno.getProperty()
                .getIRI(), EXCLUDED));
        assertTrue(ont.getAnnotationPropertiesInSignature(EXCLUDED).contains(
                anno.getProperty()));
    }

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