Package org.apache.commons.math3.stat.descriptive.moment

Examples of org.apache.commons.math3.stat.descriptive.moment.GeometricMean


        }
        return this.sumLog;
    }
    private GeometricMean _getGeoMean() {
        if (this.geoMean == null) {
            this.geoMean = new GeometricMean(this._getSumLog());
        }
        return this.geoMean;
    }
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    @Test
    public void testOverrideGeoMeanWithMathClass() throws Exception {
        double[] scores = {1, 2, 3, 4};
        SummaryStatistics stats = new SummaryStatistics();
        stats.setGeoMeanImpl(new GeometricMean());
        for(double i : scores) {
          stats.addValue(i);
        }
        Assert.assertEquals((new GeometricMean()).evaluate(scores),stats.getGeometricMean(), 0);
    }
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            TestUtils.assertEquals(dstats.getMean(), sstats.getMean(), tol);
            TestUtils.assertEquals(new Mean().evaluate(values), dstats.getMean(), tol);
            TestUtils.assertEquals(dstats.getMax(), sstats.getMax(), tol);
            TestUtils.assertEquals(new Max().evaluate(values), dstats.getMax(), tol);
            TestUtils.assertEquals(dstats.getGeometricMean(), sstats.getGeometricMean(), tol);
            TestUtils.assertEquals(new GeometricMean().evaluate(values), dstats.getGeometricMean(), tol);
            TestUtils.assertEquals(dstats.getMin(), sstats.getMin(), tol);
            TestUtils.assertEquals(new Min().evaluate(values), dstats.getMin(), tol);
            TestUtils.assertEquals(dstats.getStandardDeviation(), sstats.getStandardDeviation(), tol);
            TestUtils.assertEquals(dstats.getVariance(), sstats.getVariance(), tol);
            TestUtils.assertEquals(new Variance().evaluate(values), dstats.getVariance(), tol);
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            dest.varianceImpl = new Variance(dest.secondMoment);
        } else {
            dest.varianceImpl = source.varianceImpl.copy();
        }
        if (source.meanImpl instanceof Mean) {
            dest.meanImpl = new Mean(dest.secondMoment);
        } else {
            dest.meanImpl = source.meanImpl.copy();
        }
        if (source.getGeoMeanImpl() instanceof GeometricMean) {
            dest.geoMeanImpl = new GeometricMean((SumOfLogs) dest.sumLogImpl);
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     * <p>Double.NaN is returned if no values have been added.</p>
     *
     * @return the population variance
     */
    public double getPopulationVariance() {
        Variance populationVariance = new Variance(secondMoment);
        populationVariance.setBiasCorrected(false);
        return populationVariance.getResult();
    }
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        dest.secondMoment = source.secondMoment.copy();
        dest.n = source.n;

        // Keep commons-math supplied statistics with embedded moments in synch
        if (source.getVarianceImpl() instanceof Variance) {
            dest.varianceImpl = new Variance(dest.secondMoment);
        } else {
            dest.varianceImpl = source.varianceImpl.copy();
        }
        if (source.meanImpl instanceof Mean) {
            dest.meanImpl = new Mean(dest.secondMoment);
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        for (int i = 0; i < k; ++i) {
            sumImpl[i]     = new Sum();
            sumSqImpl[i]   = new SumOfSquares();
            minImpl[i]     = new Min();
            maxImpl[i]     = new Max();
            sumLogImpl[i= new SumOfLogs();
            geoMeanImpl[i] = new GeometricMean();
            meanImpl[i]    = new Mean();
        }

        covarianceImpl =
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        geoMeanImpl = new StorelessUnivariateStatistic[k];
        meanImpl    = new StorelessUnivariateStatistic[k];

        for (int i = 0; i < k; ++i) {
            sumImpl[i]     = new Sum();
            sumSqImpl[i]   = new SumOfSquares();
            minImpl[i]     = new Min();
            maxImpl[i]     = new Max();
            sumLogImpl[i= new SumOfLogs();
            geoMeanImpl[i] = new GeometricMean();
            meanImpl[i]    = new Mean();
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     * @param checker Convergence checker.
     */
    protected BaseOptimizer(ConvergenceChecker<PAIR> checker) {
        this.checker = checker;

        evaluations = new Incrementor(0, new MaxEvalCallback());
        iterations = new Incrementor(0, new MaxIterCallback());
    }
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        DimensionMismatchException, NonSelfAdjointOperatorException,
        NonPositiveDefiniteOperatorException, IllConditionedOperatorException,
        MaxCountExceededException {
        checkParameters(a, m, b, x);

        final IterationManager manager = getIterationManager();
        /* Initialization counts as an iteration. */
        manager.resetIterationCount();
        manager.incrementIterationCount();

        final State state;
        state = new State(a, m, b, goodb, shift, delta, check);
        state.init();
        state.refineSolution(x);
        IterativeLinearSolverEvent event;
        event = new DefaultIterativeLinearSolverEvent(this,
                                                      manager.getIterations(),
                                                      x,
                                                      b,
                                                      state.getNormOfResidual());
        if (state.bEqualsNullVector()) {
            /* If b = 0 exactly, stop with x = 0. */
            manager.fireTerminationEvent(event);
            return x;
        }
        /* Cause termination if beta is essentially zero. */
        final boolean earlyStop;
        earlyStop = state.betaEqualsZero() || state.hasConverged();
        manager.fireInitializationEvent(event);
        if (!earlyStop) {
            do {
                manager.incrementIterationCount();
                event = new DefaultIterativeLinearSolverEvent(this,
                                                              manager.getIterations(),
                                                              x,
                                                              b,
                                                              state.getNormOfResidual());
                manager.fireIterationStartedEvent(event);
                state.update();
                state.refineSolution(x);
                event = new DefaultIterativeLinearSolverEvent(this,
                                                              manager.getIterations(),
                                                              x,
                                                              b,
                                                              state.getNormOfResidual());
                manager.fireIterationPerformedEvent(event);
            } while (!state.hasConverged());
        }
        event = new DefaultIterativeLinearSolverEvent(this,
                                                      manager.getIterations(),
                                                      x,
                                                      b,
                                                      state.getNormOfResidual());
        manager.fireTerminationEvent(event);
        return x;
    }
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