Package org.apache.airavata.commons.gfac.type

Examples of org.apache.airavata.commons.gfac.type.ApplicationDescription

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        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", "/bin/echo", "/tmp");

        log("Adding deployment description ...");
        try {
            airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
            Assert.fail("Application Descriptor should already exists and should go to update.");
        } catch (DescriptorAlreadyExistsException e) {

            log("Updating application description ....");
            airavataAPI.getApplicationManager().updateApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
        }

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));

        try {
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        applicationContext.setServiceDescription(getServiceDesc());
        return applicationContext;
    }

    protected ApplicationDescription getApplicationDesc(JobTypeType jobType) {
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory
                .newInstance();
        name.setStringValue("EchoLocal");
        app.setApplicationName(name);
        ProjectAccountType projectAccountType = app.addNewProjectAccount();
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    }

    public ApplicationDescription getShellApplicationDescription() {
        if (shellApplicationDescription == null) {
            if (isNewDescriptor()) {
                shellApplicationDescription = new ApplicationDescription();
            } else {
                try {
                    shellApplicationDescription = ApplicationDescription.fromXML(getOriginalDescription().toXML());
                } catch (XmlException e) {
                    // shouldn't happen (hopefully)
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        airavataAPI.getApplicationManager().addServiceDescription(serviceDescription);
        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", OsUtils.getEchoExecutable(), OsUtils.getTempFolderPath());

        log("Adding deployment description ...");
        airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                applicationDeploymentDescription);

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));
        airavataAPI.getWorkflowManager().addWorkflow(workflow);
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        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", OsUtils.getEchoExecutable(), OsUtils.getTempFolderPath());

        log("Adding deployment description ...");
        try {
            airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
            Assert.fail("Application Descriptor should already exists and should go to update.");
        } catch (DescriptorAlreadyExistsException e) {

            log("Updating application description ....");
            airavataAPI.getApplicationManager().updateApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
        }

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));

        try {
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        } else {
          executable = getFile("src/test/resources/comma_data.sh");
          Runtime.getRuntime().exec("chmod +x "+executable.getAbsolutePath());
        }
       
    ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("comma_app_localhost", executable.getAbsolutePath(), OsUtils.getTempFolderPath());
    ApplicationDescription applicationDeploymentDescription2 = descriptorBuilder
                .buildApplicationDeploymentDescription("echo_app_localhost", OsUtils.getEchoExecutable(), OsUtils.getTempFolderPath());

        log("Adding deployment description ...");
        airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                applicationDeploymentDescription);

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));
       
        airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription2, hostDescription,
                applicationDeploymentDescription2);

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription2.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription2.getType().getApplicationName().getStringValue()));
  }
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        host.getType().setHostName(hostName);

        /*
        * App
        */
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
        name.setStringValue("EchoLocal");
        app.setApplicationName(name);
        ProjectAccountType projectAccountType = app.addNewProjectAccount();
        projectAccountType.setProjectAccountNumber("sds128");
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     * @return shell command to be executed
     * @throws GFacProviderException GFacProviderException
     */
    private String createShellCmd(JobExecutionContext jobExecutionContext) throws GFacProviderException {
        String command = "";
        ApplicationDescription appDesc = jobExecutionContext.getApplicationContext().
                getApplicationDeploymentDescription();

        if(appDesc.getType() instanceof Ec2ApplicationDeploymentType) {
            Ec2ApplicationDeploymentType type = (Ec2ApplicationDeploymentType) appDesc.getType();
            if(type.getExecutable() != null) {
                command = type.getExecutableType() + " " + type.getExecutable();
            } else {
                command = "sh" + " " + type.getExecutable();
            }
            command = setCmdParams(jobExecutionContext, command);

        } else {
            ApplicationDeploymentDescriptionType type = appDesc.getType();
            command = "sh" + " " + type.getExecutableLocation();
            command = setCmdParams(jobExecutionContext, command);
        }

        return command + '\n';
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                registeredHost = hostScheduler.schedule(registeredHosts);
            } else {
                // if user specify a host, no matter what we pick that host for all the nodes, todo: allow users to specify node specific host
                registeredHost = airavataAPI.getApplicationManager().getHostDescription(hostName);
            }
            ApplicationDescription applicationDescription =
                    airavataAPI.getApplicationManager().getApplicationDescription(serviceName, registeredHost.getType().getHostName());

            // When we run getInParameters we set the actualParameter object, this has to be fixed
            URL resource = EmbeddedGFacInvoker.class.getClassLoader().getResource("gfac-config.xml");
            OMElement inputMessage = getInParameters();
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    }

    public ApplicationDescription getShellApplicationDescription() {
        if (shellApplicationDescription == null) {
            if (isNewDescriptor()) {
                shellApplicationDescription = new ApplicationDescription();
            } else {
                try {
                    shellApplicationDescription = ApplicationDescription.fromXML(getOriginalDescription().toXML());
                } catch (XmlException e) {
                    // shouldn't happen (hopefully)
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Related Classes of org.apache.airavata.commons.gfac.type.ApplicationDescription

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  • org.apache.airavata.core.gfac.services.impl.BigRed2Test
  • org.apache.airavata.core.gfac.services.impl.BigRed2TestWithSSHAuth
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