Package org.apache.airavata.commons.gfac.type

Examples of org.apache.airavata.commons.gfac.type.ApplicationDescription

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        ApplicationDescriptorList applicationDescriptorList =
                response.getEntity(ApplicationDescriptorList.class);
        ApplicationDescriptor[] applicationDescriptors =
                applicationDescriptorList.getApplicationDescriptors();
        for (ApplicationDescriptor applicationDescriptor : applicationDescriptors) {
            ApplicationDescription applicationDescription =
                    DescriptorUtil.createApplicationDescription(applicationDescriptor);
            String[] descriptors =
                    {applicationDescriptor.getServiceDescriptor().getServiceName(),
                            applicationDescriptor.getHostdescName()};
            applicationDeploymentDescriptionMap.put(descriptors, applicationDescription);
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    serv.getType().setName("SimpleEcho");
    return serv;
  }

  private ApplicationDescription createAppDeploymentDescription() {
    ApplicationDescription appDesc = new ApplicationDescription();
    ApplicationDeploymentDescriptionType app = appDesc.getType();
    ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory
        .newInstance();
    name.setStringValue("EchoLocal");
    app.setApplicationName(name);
    app.setExecutableLocation("/bin/echo");
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        airavataAPI.getApplicationManager().addServiceDescription(serviceDescription);
        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", "/bin/echo", "/tmp");

        log("Adding deployment description ...");
        airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                applicationDeploymentDescription);

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));
        airavataAPI.getWorkflowManager().addWorkflow(workflow);
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        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", "/bin/echo", "/tmp");

        log("Adding deployment description ...");
        try {
            airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
            Assert.fail("Application Descriptor should already exists and should go to update.");
        } catch (DescriptorRecordAlreadyExistsException e) {

            log("Updating application description ....");
            airavataAPI.getApplicationManager().updateApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
        }

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));

        try {
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        airavataAPI.getApplicationManager().addServiceDescription(serviceDescription);
        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", "/bin/echo", "/tmp");

        log("Adding deployment description ...");
        airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                applicationDeploymentDescription);

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));
        airavataAPI.getWorkflowManager().addWorkflow(workflow);
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        Assert.assertTrue(airavataAPI.getApplicationManager().isServiceDescriptorExists(
                serviceDescription.getType().getName()));

        // Deployment descriptor
        ApplicationDescription applicationDeploymentDescription = descriptorBuilder
                .buildApplicationDeploymentDescription("EchoApplication", "/bin/echo", "/tmp");

        log("Adding deployment description ...");
        try {
            airavataAPI.getApplicationManager().addApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
            Assert.fail("Application Descriptor should already exists and should go to update.");
        } catch (DescriptorAlreadyExistsException e) {

            log("Updating application description ....");
            airavataAPI.getApplicationManager().updateApplicationDescription(serviceDescription, hostDescription,
                    applicationDeploymentDescription);
        }

        Assert.assertTrue(airavataAPI.getApplicationManager().isApplicationDescriptorExists(
                serviceDescription.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription.getType().getApplicationName().getStringValue()));

        log("Saving workflow ...");
        Workflow workflow = new Workflow(getWorkflowComposeContent("src/test/resources/EchoWorkflow.xwf"));

        try {
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        applicationContext.setServiceDescription(getServiceDesc());
        return applicationContext;
    }

    protected ApplicationDescription getApplicationDesc(JobTypeType jobType) {
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory
                .newInstance();
        name.setStringValue("EchoLocal");
        app.setApplicationName(name);
        ProjectAccountType projectAccountType = app.addNewProjectAccount();
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        ((GlobusHostType) host.getType()).addGlobusGateKeeperEndPoint("trestles-login2.sdsc.edu:2119/jobmanager-pbstest2");

        /*
        * App
        */
        ApplicationDescription appDesc =
                new ApplicationDescription(HpcApplicationDeploymentType.type);
        ApplicationDeploymentDescriptionType applicationDeploymentDescriptionType
                = appDesc.getType();
        applicationDeploymentDescriptionType.addNewApplicationName().setStringValue(serviceName);
        String tempDir = "/oasis/projects/nsf/uic151/gridchem/airavata-workdirs";
        String date = (new Date()).toString();
        date = date.replaceAll(" ", "_");
        date = date.replaceAll(":", "_");
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                    // and this handler is not able to find std* files?
                    try {
                     stdout = ftp.readRemoteFile(stdoutURI, gssCred, localStdOutFile);
                     stderr = ftp.readRemoteFile(stderrURI, gssCred, localStdErrFile);
                     //TODO: do we also need to set them as output parameters for another job
                     ApplicationDescription application = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription();
                     ApplicationDeploymentDescriptionType appDesc = application.getType();
                     appDesc.setStandardOutput(stdout);
                     appDesc.setStandardError(stderr);
                     jobExecutionContext.getApplicationContext().setApplicationDeploymentDescription(application);
                    }
                    catch(ToolsException e) {
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        ((GlobusHostType)host.getType()).setGlobusGateKeeperEndPointArray(new String[]{gramAddress});
        ((GlobusHostType)host.getType()).setGridFTPEndPointArray(new String[]{gridftpAddress});
        /*
           * App
           */
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType)appDesc.getType();
        ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
        name.setStringValue("EchoLocal");
        app.setApplicationName(name);
        ProjectAccountType projectAccountType = app.addNewProjectAccount();
        projectAccountType.setProjectAccountNumber("sds128");
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  • org.apache.airavata.client.tools.UltrascanDocumentCreator
  • org.apache.airavata.core.gfac.scheduler.impl.SchedulerImpl
  • org.apache.airavata.core.gfac.services.impl.BESParallelJobTest
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  • org.apache.airavata.core.gfac.services.impl.BigRed2Test
  • org.apache.airavata.core.gfac.services.impl.BigRed2TestWithSSHAuth
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