Package org.apache.airavata.client.api

Examples of org.apache.airavata.client.api.AiravataAPI

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    setRegistryURL(createRegistryURL());

        log("Configurations - Registry URL : " + getRegistryURL());

        PasswordCallback passwordCallback = new PasswordCallbackImpl();
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                passwordCallback);

        checkServerStartup(airavataAPI);

        log("Server successfully started .............................");
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        }
    }

    protected void runWorkFlow(Workflow workflow, List<String> inputValues) throws Exception {

        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        options.getCustomSecuritySettings().getCredentialStoreSecuritySettings().setTokenId("1234");

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);

        log.info("Run workflow completed ....");
        log.info("Starting monitoring ....");
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        monitor(experimentId);
    }

    protected void runWorkFlowWithoutMonitor(Workflow workflow, List<String> inputValues) throws Exception {

        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);
        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options,
                new EventDataListenerAdapter() {
                    public void notify(EventDataRepository eventDataRepo, EventData eventData) {
                        // do nothing
                    }
                });

        Assert.assertNotNull(experimentId);
        airavataAPI.getExecutionManager().waitForExperimentTermination(experimentId);

        log.info("Run workflow completed ....");

        verifyOutput(experimentId, "echo_output=Airavata_Test");

        log.info("Verifying application jobs ....");
        List<ApplicationJob> applicationJobs = airavataAPI.getProvenanceManager().getApplicationJobs(experimentId, null, null);
        Assert.assertEquals(applicationJobs.size(), 1);
    }
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        List<ApplicationJob> applicationJobs = airavataAPI.getProvenanceManager().getApplicationJobs(experimentId, null, null);
        Assert.assertEquals(applicationJobs.size(), 1);
    }

    protected void verifyOutput(String experimentId, String outputVerifyingString) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        log.info("Experiment ID Returned : " + experimentId);

        ExperimentData experimentData = airavataAPI.getProvenanceManager().getExperimentData(experimentId);

        log.info("Verifying output ...");

        List<WorkflowExecutionDataImpl> workflowInstanceData = experimentData.getWorkflowExecutionDataList();
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            }
        }
    }

    private List<WorkflowInput> setupInputs(Workflow workflow, List<String> inputValues) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = airavataAPI.getWorkflowManager().getWorkflowInputs(workflow.getName());

        Assert.assertEquals(workflowInputs.size(), inputValues.size());

        int i = 0;
        for (String valueString : inputValues) {
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        log.debug("Workflow compose - " + buffer.toString());
        return buffer.toString();
    }

    public void monitor(final String experimentId) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        final Monitor experimentMonitor = airavataAPI.getExecutionManager().getExperimentMonitor(experimentId,
                new EventDataListenerAdapter() {

                    public void notify(EventDataRepository eventDataRepo, EventData eventData) {
                        Assert.assertNotNull(eventDataRepo);
                        Assert.assertNotNull(eventData);
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    setRegistryURL(createRegistryURL());

        log("Configurations - Registry URL : " + getRegistryURL());

        PasswordCallback passwordCallback = new PasswordCallbackImpl();
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                passwordCallback);

        checkServerStartup(airavataAPI);

        log("Server successfully started .............................");
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                    runner = new PredicatedTaskRunner(provenanceWriterThreadPoolSize);
                    try {
                            List<HostDescription> hostList = getDefinedHostDescriptions();
                            for(HostDescription host:hostList){
                                // This will avoid the changes user is doing to one of the predefined Hosts during a restart of the system
                                AiravataAPI registry = getAiravataAPI();
                if(!registry.getApplicationManager().isHostDescriptorExists(host.getType().getHostName())){
                                    log.debug("Saving the predefined Host: " + host.getType().getHostName());
                                    registry.getApplicationManager().addHostDescription(host);
                                }
                            }
                    } catch (DescriptorAlreadyExistsException e) {
                            e.printStackTrace();
                        } catch (AiravataAPIInvocationException e) {
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                serviceDescription2.getType().getName(), hostDescription.getType().getHostName(),
                applicationDeploymentDescription2.getType().getApplicationName().getStringValue()));
  }

    protected void runWorkFlow(Workflow workflow, List<String> inputValues, List<String> outputValue) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);

        log.info("Run workflow completed ....");

        airavataAPI.getExecutionManager().waitForExperimentTermination(experimentId);
        verifyOutput(experimentId, outputValue);
    }
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        } catch (URISyntaxException e1) {
            throw new WorkflowRuntimeException(e1);
        }
        WorkflowInterpretorEventListener listener = null;
        WorkflowInterpreter interpreter = null;
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(gatewayId, username);
    WorkflowInterpreterConfiguration workflowInterpreterConfiguration = new WorkflowInterpreterConfiguration(workflow,topic,conf.getMessageBoxURL(), conf.getBrokerURL(), airavataAPI, conf, null, null);
        workflowInterpreterConfiguration.setGfacEmbeddedMode(gfacEmbeddedMode);
        workflowInterpreterConfiguration.setActOnProvenance(provenance);

        if (builder.getSecurityContext().getAmazonWebservices() != null) {
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Related Classes of org.apache.airavata.client.api.AiravataAPI

  • org.apache.airavata.api.samples.ExperimentSample
  • org.apache.airavata.client.AiravataAPIFactory
  • org.apache.airavata.client.AiravataClient
  • org.apache.airavata.client.samples.CreateLaunchExperiment
  • org.apache.airavata.client.samples.CreateLaunchExperimentUS3
  • org.apache.airavata.client.samples.MonitorWorkflow
  • org.apache.airavata.client.samples.TestCreateLaunchExperiment
  • org.apache.airavata.core.gfac.extension.post.OutputRegister
  • org.apache.airavata.core.gfac.scheduler.impl.SchedulerImpl
  • org.apache.airavata.gfac.client.GfacClientFactoryTest
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