Package com.compomics.util.gui.waiting.waitinghandlers

Examples of com.compomics.util.gui.waiting.waitinghandlers.ProgressDialogX

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        }
        final boolean finalAccessionsOnly = accessionsOnly;

        if (selectedFile != null) {

            progressDialog = new ProgressDialogX(this, peptideShakerGUI,
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                    true);
            progressDialog.setPrimaryProgressCounterIndeterminate(true);
            progressDialog.setTitle("Exporting. Please Wait...");
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                        break;
                    }
                }
            }

            progressDialog = new ProgressDialogX(this, peptideShakerGUI,
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                    true);
            progressDialog.setPrimaryProgressCounterIndeterminate(true);
            progressDialog.setTitle("Exporting. Please Wait...");
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        }

        final String outputFileName = fileName;
        final ProjectExportDialog projectExportDialog = this; // needed due to threading issues

        progressDialog = new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);
        progressDialog.setTitle("Exporting PRIDE XML. Please Wait...");
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     *
     * @param evt
     */
    private void reshakeButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_reshakeButtonActionPerformed

        progressDialog = new ProgressDialogX(prideReShakeGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);

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            if (downloadFolder != null) {

                prideReShakeGUI.getPeptideShakerGUI().setLastSelectedFolder(downloadFolder.getAbsolutePath());

                progressDialog = new ProgressDialogX(prideReShakeGUI,
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        true);

                progressDialog.setPrimaryProgressCounterIndeterminate(true);
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                if (downloadFolder != null) {

                    prideReShakeGUI.getPeptideShakerGUI().setLastSelectedFolder(downloadFolder.getAbsolutePath());

                    progressDialog = new ProgressDialogX(prideReShakeGUI,
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                            true);

                    progressDialog.setPrimaryProgressCounterIndeterminate(true);
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        proteinScrollPane.getViewport().setOpaque(false);
        peptideScrollPane.getViewport().setOpaque(false);
        pdbJScrollPane.getViewport().setOpaque(false);
        pdbChainsJScrollPane.getViewport().setOpaque(false);

        SelfUpdatingTableModel.addSortListener(proteinTable, new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true));

        // add scrolling listeners
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        if (jmolStructureShown) {
            updatePeptideToPdbMapping();
        } else {

            progressDialog = new ProgressDialogX(peptideShakerGUI,
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                    true);
            progressDialog.setPrimaryProgressCounterIndeterminate(true);
            progressDialog.setTitle("Loading PDB Structure. Please Wait...");
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    /**
     * Displays the results in the result tables.
     */
    public void displayResults() {

        progressDialog = new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);
        progressDialog.setTitle("Updating Data. Please Wait...");
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     */
    private void updatePdbTable(String aProteinKey) {

        final String proteinKey = aProteinKey;

        progressDialog = new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);

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Related Classes of com.compomics.util.gui.waiting.waitinghandlers.ProgressDialogX

  • eu.isas.peptideshaker.export.OutputGenerator
  • eu.isas.peptideshaker.gui.exportdialogs.FeaturesPreferencesDialog
  • eu.isas.peptideshaker.gui.exportdialogs.FollowupPreferencesDialog
  • eu.isas.peptideshaker.gui.exportdialogs.InclusionListExportDialog
  • eu.isas.peptideshaker.gui.exportdialogs.MethodsSectionDialog
  • eu.isas.peptideshaker.gui.exportdialogs.MzIdentMLExportDialog
  • eu.isas.peptideshaker.gui.NewDialog
  • eu.isas.peptideshaker.gui.PeptideShakerGUI
  • eu.isas.peptideshaker.gui.preferencesdialogs.ProjectDetailsDialog
  • eu.isas.peptideshaker.gui.pride.DatabaseHelpDialog
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