Package eu.isas.peptideshaker.gui

Examples of eu.isas.peptideshaker.gui.PeptideShakerGUI


                    new Thread("SaveThread") {
                        @Override
                        public void run() {

                            try {
                                PeptideShakerGUI peptideShakerGUI = followupPreferencesDialog.getPeptideShakerGUI();
                                InclusionListExport.exportInclusionList(outputFile, peptideShakerGUI.getIdentification(),
                                        peptideShakerGUI.getIdentificationFeaturesGenerator(), getProteinFilters(), getPeptideFilters(),
                                        exportFormat, peptideShakerGUI.getSearchParameters(), WIDTH, progressDialog, peptideShakerGUI.getFilterPreferences());

                                boolean processCancelled = progressDialog.isRunCanceled();
                                progressDialog.setRunFinished();

                                if (!processCancelled) {
View Full Code Here


                } catch (Exception e) {
                    tips = new ArrayList<String>();
                    // Do something here?
                }

                PeptideShakerGUI peptideShakerGUI = new PeptideShakerGUI(); // dummy object to get at the version and tips
                peptideShakerGUI.setUpLogFile(false); // redirect the error stream to the PeptideShaker log file
                waitingHandler = new WaitingDialog(new DummyFrame("PeptideShaker " + PeptideShaker.getVersion(), "/icons/peptide-shaker.gif"),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        false, tips, "Importing Data", "PeptideShaker", PeptideShaker.getVersion(), true);
                ((WaitingDialog) waitingHandler).setCloseDialogWhenImportCompletes(false, false);
View Full Code Here

TOP

Related Classes of eu.isas.peptideshaker.gui.PeptideShakerGUI

Copyright © 2018 www.massapicom. All rights reserved.
All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.