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package data.cerevisiae.ranjan2013swr1;
import fork.lib.base.file.management.Dirs;
import java.io.File;
import data.cerevisiae.inhouse.jointable.JoinTable;
/**
*
* @author man-mqbpjmg4
*/
public class JoinTable1 extends JoinTable{
public static void main(String[] args) throws Exception { //debug
File dir= Dirs.getFile("dir");
File ref= new File(dir+"/anno/xu_2009_orfs.bed");
File d= new File(dir+"/other_datasets\\ranjan2013_swr1-chip\\score");
JoinTable jj= new JoinTable();
jj.initRows(ref);
jj.addBedFile(new File(d+"/swr1-chip_wt/swr1-chip_wt_sacCer1-xu_gene_five_0.150.bed"));
jj.addBedFile(new File(d+"/swr1-chip_wt/swr1-chip_wt_sacCer1-xu_gene_three_150.0.bed"));
jj.addBedFile(new File(d+"/swr1-chip_htz1d/swr1-chip_htz1d_sacCer1-xu_gene_five_0.150.bed"));
jj.addBedFile(new File(d+"/swr1-chip_htz1d/swr1-chip_htz1d_sacCer1-xu_gene_three_150.0.bed"));
jj.addBedFile(new File(d+"/swr1-chip_wt/swr1-chip_wt_sacCer1-xu_gene_five_150.0.bed"));
jj.addBedFile(new File(d+"/swr1-chip_htz1d/swr1-chip_htz1d_sacCer1-xu_gene_five_150.0.bed"));
jj.writeToFile(new File(d+"/combine.txt"));
}
}