Package data.cerevisiae.inhouse.a_score

Examples of data.cerevisiae.inhouse.a_score.ScoreChipSeqGene

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        File f= fs[i];
        if(FileName.getExt(f).equals("wig")){
            LandscapeBuilder lb= new BedGraphReader(f).getLandscapeBuilder();
            int rlen= 100;
            File od= new File(d+"/score/"+FileName.getBaseName(f));
            ScoreChipSeqGene sc= new ScoreChipSeqGene(lb, org, rlen, od, FileName.getBaseName(f));
        }
    }

}
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    LandscapeBuilder lb= new BedGraphReader(f).getLandscapeBuilder();
    int rlen= 100;


    File od= new File(d+"/score/"+FileName.getBaseName(f));
    ScoreChipSeqGene sc= new ScoreChipSeqGene(lb, org, rlen, od, FileName.getBaseName(f));


}
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        File f= fs[i];
        if(FileName.getExt(f).equals("wig")){
            LandscapeBuilder lb= new BedGraphReader(f).getLandscapeBuilder();
            int rlen= 100;
            File od= new File(d+"/score/"+FileName.getBaseName(f));
            ScoreChipSeqGene sc= new ScoreChipSeqGene(lb, org, rlen, od, FileName.getBaseName(f));
        }
    }

}
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Related Classes of data.cerevisiae.inhouse.a_score.ScoreChipSeqGene

  • data.cerevisiae.auerbach2013_polii.Score
  • data.cerevisiae.histmod.liu2005_histmods.Score
  • data.cerevisiae.ranjan2013swr1.Score
  • fork.lib.bio.anno.genomic.BedGraphReader
  • fork.lib.bio.anno.genomic.BedReader
  • fork.lib.bio.anno.genomic.LandscapeBuilder
  • fork.lib.bio.anno.genomic.LandscapeScoring
  • java.io.File
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