Classes and Subpackages of picard.sam.markduplicates.util

All Classes in picard.sam.markduplicates.util

picard.sam.markduplicates.util.AbstractMarkDuplicatesCommandLineProgram
picard.sam.markduplicates.util.AbstractMarkDuplicatesCommandLineProgram$PgIdGenerator
picard.sam.markduplicates.util.AbstractMarkDuplicatesCommandLineProgram$SamHeaderAndIterator
picard.sam.markduplicates.util.AbstractOpticalDuplicateFinderCommandLineProgram
picard.sam.markduplicates.util.DiskBasedReadEndsForMarkDuplicatesMap
picard.sam.markduplicates.util.DiskBasedReadEndsForMarkDuplicatesMap$Codec
picard.sam.markduplicates.util.LibraryIdGenerator
picard.sam.markduplicates.util.MarkQueue
picard.sam.markduplicates.util.MarkQueue$MarkQueueComparator
picard.sam.markduplicates.util.MarkQueue$ReadEndsMCComparator
picard.sam.markduplicates.util.MemoryBasedReadEndsForMarkDuplicatesMap
picard.sam.markduplicates.util.OpticalDuplicateFinder
picard.sam.markduplicates.util.OpticalDuplicateFinder$PhysicalLocation
picard.sam.markduplicates.util.OpticalDuplicateFinderTest
picard.sam.markduplicates.util.PhysicalLocationForMateCigar
picard.sam.markduplicates.util.PhysicalLocationForMateCigarSet
picard.sam.markduplicates.util.ReadEnds
picard.sam.markduplicates.util.ReadEndsForMarkDuplicates
picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesMap
picard.sam.markduplicates.util.ReadEndsForMateCigar
picard.sam.markduplicates.util.SamRecordWithOrdinalAndSetDuplicateReadFlag

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