Classes and Subpackages of org.broadinstitute.gatk.engine.datasources.providers

org.broadinstitute.gatk.engine.datasources.providers.AllLocusView
org.broadinstitute.gatk.engine.datasources.providers.AllLocusViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.CoveredLocusView
org.broadinstitute.gatk.engine.datasources.providers.CoveredLocusViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.IntervalOverlappingRODsFromStream
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedView
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedView$RMDDataState
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedViewUnitTest$CompareFeatures
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedViewUnitTest$ReadMetaDataTrackerRODStreamTest
org.broadinstitute.gatk.engine.datasources.providers.IntervalReferenceOrderedViewUnitTest$TribbleIteratorFromCollection
org.broadinstitute.gatk.engine.datasources.providers.InvalidPositionException
org.broadinstitute.gatk.engine.datasources.providers.LocusReferenceView
org.broadinstitute.gatk.engine.datasources.providers.LocusReferenceView$Provider
org.broadinstitute.gatk.engine.datasources.providers.LocusReferenceViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.LocusShardDataProvider
org.broadinstitute.gatk.engine.datasources.providers.LocusView
org.broadinstitute.gatk.engine.datasources.providers.LocusViewTemplate
org.broadinstitute.gatk.engine.datasources.providers.LocusViewTemplate$SAMRecordIterator
org.broadinstitute.gatk.engine.datasources.providers.ManagingReferenceOrderedView
org.broadinstitute.gatk.engine.datasources.providers.RODMetaDataContainer
org.broadinstitute.gatk.engine.datasources.providers.ReadBasedReferenceOrderedView
org.broadinstitute.gatk.engine.datasources.providers.ReadReferenceView
org.broadinstitute.gatk.engine.datasources.providers.ReadReferenceView$Provider
org.broadinstitute.gatk.engine.datasources.providers.ReadReferenceViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.ReadShardDataProvider
org.broadinstitute.gatk.engine.datasources.providers.ReadView
org.broadinstitute.gatk.engine.datasources.providers.ReferenceOrderedDataState
org.broadinstitute.gatk.engine.datasources.providers.ReferenceOrderedView
org.broadinstitute.gatk.engine.datasources.providers.ReferenceOrderedViewUnitTest
org.broadinstitute.gatk.engine.datasources.providers.ReferenceView
org.broadinstitute.gatk.engine.datasources.providers.ReferenceViewTemplate
org.broadinstitute.gatk.engine.datasources.providers.RodLocusView
org.broadinstitute.gatk.engine.datasources.providers.ShardDataProvider
org.broadinstitute.gatk.engine.datasources.providers.ShardDataProviderUnitTest
org.broadinstitute.gatk.engine.datasources.providers.ShardDataProviderUnitTest$ConflictingTestView
org.broadinstitute.gatk.engine.datasources.providers.ShardDataProviderUnitTest$TestView
org.broadinstitute.gatk.engine.datasources.providers.View

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All Classes in org.broadinstitute.gatk.engine.datasources.providers