Package data.cerevisiae.inhouse.jointable

Examples of data.cerevisiae.inhouse.jointable.JoinTable.writeToFile()

29
30
31
32
33
34
35
36
37
38
39
    jj.initRows( new File(dir+"/anno/xu_2009_orfs.bed") );
   
   
    jj.addTextFileChunk(f);
   
    jj.writeToFile(new File(d+"/combine.txt"));
   
   
}
   
   
View Full Code Here
36
37
38
39
40
41
42
43
44
45
46
            jj.addBedFile(new File(d+"/"+fn+"/"+fn+"_sacCer1-xu_gene_five_0.150.bed"));
            jj.addBedFile(new File(d+"/"+fn+"/"+fn+"_sacCer1-xu_gene_three_150.0.bed"));
        }
    }
   
    jj.writeToFile(new File(d+"/combine.txt"));
   
   
   
}
   
View Full Code Here
43
44
45
46
47
48
49
50
51
52
53
    for( int i=1; i<cols.length; i++ ){
        jj.addHashMapIDToVal(rt.getHashMap(0, i), cols[i]);
    }

    File out= new File(wd+"/combine.txt");
    jj.writeToFile(out);
   
}
   
   
}
View Full Code Here
33
34
35
36
37
38
39
40
41
42
43
    jj.addBedFile(new File(d+"/swr1-chip_htz1d/swr1-chip_htz1d_sacCer1-xu_gene_three_150.0.bed"));
    jj.addBedFile(new File(d+"/swr1-chip_wt/swr1-chip_wt_sacCer1-xu_gene_five_150.0.bed"));
    jj.addBedFile(new File(d+"/swr1-chip_htz1d/swr1-chip_htz1d_sacCer1-xu_gene_five_150.0.bed"));
   
   
    jj.writeToFile(new File(d+"/combine.txt"));
   
   
}
   
   
View Full Code Here
53
54
55
56
57
58
59
60
61
62
63
    jj.addBedFile(new File(d+"/by4741-wt_ypg_20140313-r1_pe1_read.bed"));
    jj.addBedFile(new File(d+"/by4741-wt_ypg_20140313-r2_pe1_read.bed"));



    jj.writeToFile(new File(d+"/combine.txt"));
   
   
}
   
   
View Full Code Here
44
45
46
47
48
49
50
51
52
53
54
    jj.addBedFile(new File(d+"/219-swr1d_r1_sacCer1-xu_gene_five_0.150.bed"));
    jj.addBedFile(new File(d+"/219-swr1d_r1_sacCer1-xu_gene_three_150.0.bed"));
   

    File out= new File(wd+"/combine.txt");
    jj.writeToFile(out);
   
}
   
   
   
View Full Code Here
TOP
Copyright © 2018 www.massapi.com. All rights reserved.
All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.