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package data.cerevisiae.inhouse.inhouseswr1;
import fork.lib.base.file.io.txt.ReadTable;
import fork.lib.base.file.management.Dirs;
import java.io.File;
import data.cerevisiae.inhouse.jointable.JoinTable;
/**
*
* @author man-mqbpjmg4
*/
public class JoinTables extends JoinTable{
public static void main(String[] args) throws Exception{ //debug
File dir= Dirs.getFile("dir");
File nf= new File(dir+"/anno/sgd_name.bed");
File ref= new File(dir+"/anno/xu_2009_orfs.bed");
File d= new File(dir+"/data/chip-seq\\norm\\score\\sacCer1-xu\\219-swr1d_r1");
JoinTable jj= new JoinTable();
jj.initRows(ref);
jj.addNameBedFile(nf);
File wd= new File(dir+"/other_datasets/inhouse/swr1d");
wd.mkdirs();
jj.addBedFile(new File(d+"/219-swr1d_r1_sacCer1-xu_gene_five_0.150.bed"));
jj.addBedFile(new File(d+"/219-swr1d_r1_sacCer1-xu_gene_three_150.0.bed"));
File out= new File(wd+"/combine.txt");
jj.writeToFile(out);
}
}