Package picard.analysis.directed

Examples of picard.analysis.directed.InsertSizeMetricsCollector


    @Override protected void setup(final SAMFileHeader header, final File samFile) {
        IOUtil.assertFileIsWritable(OUTPUT);
        IOUtil.assertFileIsWritable(Histogram_FILE);

        //Delegate actual collection to InsertSizeMetricCollector
        multiCollector = new InsertSizeMetricsCollector(METRIC_ACCUMULATION_LEVEL, header.getReadGroups(), MINIMUM_PCT, Histogram_WIDTH, DEVIATIONS);
    }
View Full Code Here

TOP

Related Classes of picard.analysis.directed.InsertSizeMetricsCollector

Copyright © 2018 www.massapicom. All rights reserved.
All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.