Examples of picard.analysis.directed.InsertSizeMetricsCollector$PerUnitInsertSizeMetricsCollector

picard.analysis.directed.InsertSizeMetricsCollector
A Collector for individual InsertSizeMetrics for a given SAMPLE or SAMPLE/LIBRARY or SAMPLE/LIBRARY/READ_GROUP (depending on aggregation levels)

    @Override protected void setup(final SAMFileHeader header, final File samFile) {
        IOUtil.assertFileIsWritable(OUTPUT);
        IOUtil.assertFileIsWritable(Histogram_FILE);


        //Delegate actual collection to InsertSizeMetricCollector
        multiCollector = new InsertSizeMetricsCollector(METRIC_ACCUMULATION_LEVEL, header.getReadGroups(), MINIMUM_PCT, Histogram_WIDTH, DEVIATIONS);
    }

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Related Classes of picard.analysis.directed.InsertSizeMetricsCollector$PerUnitInsertSizeMetricsCollector

picard.analysis.CollectInsertSizeMetrics

picard.analysis.InsertSizeMetrics

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