Package org.moltools.apps.probemaker.design

Examples of org.moltools.apps.probemaker.design.DefaultProbeDesigner

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  }

  protected Probe[] performModeTest(byte mode) {
    pm.getProject().getTagSettings().getTagLibraries()[0].setMode(mode);
    pm.getProbeDesignTask(false, true, null, new DefaultNamingScheme(), new AllAcceptor(),
        new NoSelector(), new DefaultProbeDesigner(new GreedyTagAllocator()), new DefaultTSSPairDesigner(new DefaultTSSConstructor()), new StreamErrorHandler(System.out,true)).run();
   
    Probe[] probes = pm.getProject().getProbes().getSequenceList().toArray(new Probe[5]);
    return probes;
  }
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      if (platform.getUI().inputData((ParameterPlugIn) ta,CoreMessages.getString("ProbeMakerPlugIn.TITLE_TAGALLOC_SETTINGS"))) { //$NON-NLS-1$
        return;
      }
    }

    final ProbeDesigner designer = new DefaultProbeDesigner(ta);
    TSSPairDesigner td = new DefaultTSSPairDesigner(con);
    NamingScheme namer = new DefaultNamingScheme();   
   
    String date = SimpleDateFormat.getDateTimeInstance(DateFormat.SHORT, DateFormat.SHORT).format(new Date());
   
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Related Classes of org.moltools.apps.probemaker.design.DefaultProbeDesigner

  • org.moltools.apps.probemaker.NoDesignLogWriter
  • org.moltools.apps.probemaker.ProbeMakerLauncher
  • org.moltools.apps.probemaker.ProbeMakerPlugIn
  • org.moltools.apps.probemaker.seq.Probe
  • org.moltools.apps.probemaker.seq.ProbeMakerTarget
  • org.moltools.apps.probemaker.test.HybInterferenceModuleTest
  • org.moltools.apps.probemaker.test.ProjectIOTest
  • org.moltools.apps.probemaker.test.TagAllocationTest
  • org.moltools.apps.probemaker.test.TSSConstructionTest
  • java.util.Properties
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