Package org.moltools.apps.probemaker

Examples of org.moltools.apps.probemaker.NoDesignLogWriter

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    badTagsAll = new List[0];
  }

  public void setup(DefiniteSequenceDB<Probe> probes, TagAllocationTable tat, TagSettings tagSettings, Settings settings, Analyzer analyzer, DesignLogWriter log) {
    this.analyzer = analyzer;
    this.designlog = log == null ? new NoDesignLogWriter() : log;

    //Set older probes
    this.probes = probes;
    if (probes == null) {
      probes = new ListSequenceDB<Probe>();
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    Map<String,String> params = p.getSettings().getDesignParameters();

    allocator.setup(p.getProbes(),p.getTagAllocationTable(),p.getTagSettings(), p.getSettings(), analyzer, log);
    addParameters(params);

    this.log = log == null ? new NoDesignLogWriter() : log;   
    writeProjectInfoToLog();
  }
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Related Classes of org.moltools.apps.probemaker.NoDesignLogWriter

  • org.moltools.apps.probemaker.design.DefaultProbeDesigner
  • org.moltools.apps.probemaker.ext.ta.GreedyTagAllocator
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