Examples of org.apache.uima.resource.metadata.TypeSystemDescription

Package org.apache.uima.resource.metadata

Examples of org.apache.uima.resource.metadata.TypeSystemDescription

org.apache.uima.resource.metadata.TypeSystemDescription
Description of a CAS TypeSystem. This implements MetaDataObject, which implements {@link org.apache.uima.util.XMLizable}, so it can be serialized to and deserialized from an XML element.
Type systems can declare that they {@link #getImports() import} other type systems. At runtime,these imports will be resolved to create a single logical type system.
Note that type system imports are not automatically resolved when a TypeSytemDescription is deserialized from XML. To resolve the imports, call the {@link #resolveImports()} method. Importresolution is done automatically when a CAS is created using a TypeSystemDescription.
Type systems can optionally be assigned a {@link #getName() name}, {@link #getDescription() description}, {@link #getVendor() vendor}, and {@link #getVersion() version}. It is recommended that these properties be set on any type system that is meant to be shared by (imported by) multiple components.

  protected void setUp() throws Exception {
    try {
      super.setUp();
      UIMAFramework.getXMLParser().enableSchemaValidation(true);
      
      TypeSystemDescription typeSystem = new TypeSystemDescription_impl();
      TypeDescription type1 = typeSystem.addType("Fake", "<b>Fake</b> Type", "Annotation");
      type1.addFeature("TestFeature", "For Testing Only",
              CAS.TYPE_NAME_STRING);
      TypeDescription enumType = typeSystem.addType("EnumType", "Test Enumerated Type",
              "uima.cas.String");
      enumType.setAllowedValues(new AllowedValue[] { new AllowedValue_impl("One", "First Value"),
          new AllowedValue_impl("Two", "Second Value") });


      TypePriorities typePriorities = new TypePriorities_impl();

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      "org/apache/uima/analysis_engine/impl/documentAnnotationRedefinitionTS.xml";
    File file = JUnitExtension.getFile(tsDescriptor);
    XMLParser parser = UIMAFramework.getXMLParser();
    boolean resourceInitExc = false;
    try {
      TypeSystemDescription tsd = (TypeSystemDescription) parser.parse(new XMLInputSource(file));
      CasCreationUtils.createCas(tsd, null, new FsIndexDescription[0]);
    } catch (InvalidXMLException e) {
      e.printStackTrace();
      assertTrue(false);
    } catch (IOException e) {

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  // and that no merging occurs of the allowed values - the 1st one "wins"  (as of 5/2013)
  // See Jira https://issues.apache.org/jira/browse/UIMA-2917
  public void testStringSubtype() throws Exception {
    try {


      TypeSystemDescription ts1desc = UIMAFramework.getXMLParser()
          .parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension
                  .getFile("CasCreationUtilsTest/TypeSystemMergeStringSubtypeBasePlus.xml")));
      
      TypeSystemDescription result = checkMergeTypeSystem(ts1desc, "TypeSystemMergeStringSubtypeBase.xml",
          ResourceInitializationException.ALLOWED_VALUES_NOT_IDENTICAL);
      
    } catch (Exception e) {
      JUnitExtension.handleException(e);
    }

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    }    
  }


  public void testMergeTypeSystems() throws Exception {
    try {
      TypeSystemDescription ts1desc = UIMAFramework.getXMLParser().parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension.getFile("CasCreationUtilsTest/TypeSystem1.xml")));


      Assert.assertEquals(1, ts1desc.getType("Type1").getFeatures().length);
      Assert.assertEquals(1, ts1desc.getType("Type2").getFeatures().length);
      Assert.assertEquals(1, ts1desc.getType("Type3").getFeatures().length);


      TypeSystemDescription ts2desc = UIMAFramework.getXMLParser().parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension.getFile("CasCreationUtilsTest/TypeSystem2.xml")));
      Assert.assertEquals(1, ts2desc.getType("Type1").getFeatures().length);
      Assert.assertEquals(1, ts2desc.getType("Type2").getFeatures().length);


      ArrayList<TypeSystemDescription> tsList = new ArrayList<TypeSystemDescription>();
      tsList.add(ts1desc);
      tsList.add(ts2desc);
      Map typesWithMergedFeatures = new HashMap();
      TypeSystemDescription merged = CasCreationUtils.mergeTypeSystems(tsList, UIMAFramework
              .newDefaultResourceManager(), typesWithMergedFeatures);


      Assert.assertEquals(2, merged.getType("Type1").getFeatures().length);
      Assert.assertEquals(2, merged.getType("Type2").getFeatures().length);
      Assert.assertEquals(1, merged.getType("Type3").getFeatures().length);


      assertEquals(2, typesWithMergedFeatures.size());
      assertTrue(typesWithMergedFeatures.containsKey("Type1"));
      assertTrue(typesWithMergedFeatures.containsKey("Type2"));

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  }
  
  public void testMergeTypeSystemElementType() throws Exception {
    try {


      TypeSystemDescription ts1desc = UIMAFramework.getXMLParser()
          .parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension
                  .getFile("CasCreationUtilsTest/TypeSystemMergeBase.xml")));
      
      checkMergeTypeSystem(ts1desc, "TypeSystemMergeWrongElementType1.xml",

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    }
  }
    
  private TypeSystemDescription checkMergeTypeSystem(TypeSystemDescription ts1desc, String typeFile, String msgKey)
  throws Exception {
    TypeSystemDescription mergedTS = null;
    try {




      TypeSystemDescription ts2desc = UIMAFramework
      .getXMLParser()
      .parseTypeSystemDescription(
          new XMLInputSource(
              JUnitExtension
              .getFile("CasCreationUtilsTest/" + typeFile)));

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    return mergedTS;
  }
  
  public void testMergeTypeSystemsWithDifferentSupertypes() throws Exception {
    try {
      TypeSystemDescription ts1desc = UIMAFramework.getXMLParser().parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension.getFile("CasCreationUtilsTest/SupertypeMergeTest1.xml")));
      assertEquals("uima.tcas.Annotation", ts1desc.getType("uima.test.Sub").getSupertypeName());
      TypeSystemDescription ts2desc = UIMAFramework.getXMLParser().parseTypeSystemDescription(
              new XMLInputSource(JUnitExtension.getFile("CasCreationUtilsTest/SupertypeMergeTest2.xml")));
      assertEquals("uima.test.Super", ts2desc.getType("uima.test.Sub").getSupertypeName());


      List<TypeSystemDescription> tsList = new ArrayList<TypeSystemDescription>();
      tsList.add(ts1desc);
      tsList.add(ts2desc);
      TypeSystemDescription merged = CasCreationUtils.mergeTypeSystems(tsList, UIMAFramework
              .newDefaultResourceManager());
      assertEquals("uima.test.Super", merged.getType("uima.test.Sub").getSupertypeName());


      // try merging in the other order - bug UIMA-826 was an order dependency in the behavior of
      // this kind of merging
      tsList = new ArrayList<TypeSystemDescription>();
      tsList.add(ts2desc);
      tsList.add(ts1desc);
      merged = CasCreationUtils.mergeTypeSystems(tsList, UIMAFramework
              .newDefaultResourceManager());
      assertEquals("uima.test.Super", merged.getType("uima.test.Sub").getSupertypeName());


    } catch (Exception e) {
      JUnitExtension.handleException(e);
    }
  }

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      File descFile = JUnitExtension
              .getFile("TextAnalysisEngineImplTest/AggregateTaeForMergeTest.xml");
      AnalysisEngineDescription desc = UIMAFramework.getXMLParser().parseAnalysisEngineDescription(
              new XMLInputSource(descFile));
      Map mergedTypes = new HashMap();
      TypeSystemDescription typeSys = CasCreationUtils.mergeDelegateAnalysisEngineTypeSystems(desc,
              UIMAFramework.newDefaultResourceManager(), mergedTypes);


      // test results of merge
      Assert.assertEquals(8, typeSys.getTypes().length);


      TypeDescription type0 = typeSys.getType("NamedEntity");
      Assert.assertNotNull(type0);
      Assert.assertEquals("uima.tcas.Annotation", type0.getSupertypeName());
      Assert.assertEquals(1, type0.getFeatures().length);


      TypeDescription type1 = typeSys.getType("Person");
      Assert.assertNotNull(type1);
      Assert.assertEquals("NamedEntity", type1.getSupertypeName());
      Assert.assertEquals(1, type1.getFeatures().length);


      TypeDescription type2 = typeSys.getType("Place");
      Assert.assertNotNull(type2);
      Assert.assertEquals("NamedEntity", type2.getSupertypeName());
      Assert.assertEquals(3, type2.getFeatures().length);


      TypeDescription type3 = typeSys.getType("Org");
      Assert.assertNotNull(type3);
      Assert.assertEquals("uima.tcas.Annotation", type3.getSupertypeName());
      Assert.assertEquals(0, type3.getFeatures().length);


      TypeDescription type4 = typeSys.getType("DocumentStructure");
      Assert.assertNotNull(type4);
      Assert.assertEquals("uima.tcas.Annotation", type4.getSupertypeName());
      Assert.assertEquals(0, type4.getFeatures().length);


      TypeDescription type5 = typeSys.getType("Paragraph");
      Assert.assertNotNull(type5);
      Assert.assertEquals("DocumentStructure", type5.getSupertypeName());
      Assert.assertEquals(0, type5.getFeatures().length);


      TypeDescription type6 = typeSys.getType("Sentence");
      Assert.assertNotNull(type6);
      Assert.assertEquals("DocumentStructure", type6.getSupertypeName());
      Assert.assertEquals(0, type6.getFeatures().length);


      TypeDescription type7 = typeSys.getType("test.flowController.Test");
      Assert.assertNotNull(type7);
      Assert.assertEquals("uima.tcas.Annotation", type7.getSupertypeName());
      Assert.assertEquals(1, type7.getFeatures().length);


      // Place has merged features, Person has different supertype

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      mSimpleDesc.setFrameworkImplementation(Constants.JAVA_FRAMEWORK_NAME);
      mSimpleDesc.setPrimitive(true);
      mSimpleDesc
              .setAnnotatorImplementationName("org.apache.uima.analysis_engine.impl.TestAnnotator");
      mSimpleDesc.getMetaData().setName("Simple Test");
      TypeSystemDescription typeSys = new TypeSystemDescription_impl();
      typeSys.addType("foo.Bar", "test", "uima.tcas.Annotation");
      typeSys.addType("NamedEntity", "test", "uima.tcas.Annotation");
      typeSys.addType("DocumentStructure", "test", "uima.tcas.Annotation");
      mSimpleDesc.getAnalysisEngineMetaData().setTypeSystem(typeSys);
      Capability cap = new Capability_impl();
      cap.addOutputType("NamedEntity", true);
      cap.addOutputType("DocumentStructure", true);
      Capability[] caps = new Capability[] {cap};

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  public void testSetupTypeSystem() throws Exception {
    try {
      // test that duplicate feature names on supertype and subtype works
      // regardless of the order in which the types appear in the TypeSystemDescription
      TypeSystemDescription tsd1 = new TypeSystemDescription_impl();
      TypeDescription supertype = tsd1.addType("test.Super", "", "uima.cas.TOP");
      supertype.addFeature("testfeat", "", "uima.cas.Integer");
      TypeDescription subtype = tsd1.addType("test.Sub", "", "test.Super");
      subtype.addFeature("testfeat", "", "uima.cas.Integer");


      CASMgr casMgr = CASFactory.createCAS();
      CasCreationUtils.setupTypeSystem(casMgr, tsd1);
      assertNotNull(casMgr.getTypeSystemMgr().getType("test.Super")
              .getFeatureByBaseName("testfeat"));


      TypeSystemDescription tsd2 = new TypeSystemDescription_impl();
      tsd2.setTypes(new TypeDescription[] { subtype, supertype });


      casMgr = CASFactory.createCAS();
      CasCreationUtils.setupTypeSystem(casMgr, tsd2);
      assertNotNull(casMgr.getTypeSystemMgr().getType("test.Super")
              .getFeatureByBaseName("testfeat"));

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