Examples of IOntologyError

edu.pitt.dbmi.nlp.noble.ontology.IOntologyError
exception caused for whatever reason, unhandled wraps other exceptions @author tseytlin
edu.pitt.ontology.IOntologyError
exception caused for whatever reason, unhandled wraps other exceptions @author tseytlin

Examples of edu.pitt.ontology.IOntologyError

        OWLNamedClass c = (OWLNamedClass) o;
        result.addAll(computeResults(c,c.getInferredSuperclasses(),IResult.SUPERCLASS));
      }
      return result.toArray(new IResult[0]);
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
  }

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Examples of edu.pitt.ontology.IOntologyError

      for(Object o: ontology.getModel().getChangedInferredClasses()){
        OWLNamedClass cls = (OWLNamedClass) o;
        System.out.println("inferred types: "+cls);
      }
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    return new IResult [0];
  }

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Examples of edu.pitt.ontology.IOntologyError

      List<IResult> result = new ArrayList<IResult>();
      result.addAll(computeResults(c,reasoner.getSuperclasses(c),IResult.SUPERCLASS));
      //result.addAll(computeResults(c,reasoner.getSubclasses(c),IResult.SUBCLASS));
      return result.toArray(new IResult[0]);
    }catch(Exception ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getSubclasses((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getSuperclasses((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getEquivalentClasses((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getIndividualsBelongingToClass((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IInstance [])o:new IInstance[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IInstance[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getDescendantClasses((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getAncestorClasses((OWLClass)ontology.convertSetValue(cls)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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Examples of edu.pitt.ontology.IOntologyError

    try{
      Object [] o = ontology.convertGetValues(
          reasoner.getIndividualTypes((OWLIndividual)ontology.convertSetValue(inst)));
      return (o.length > 0)?(IClass [])o:new IClass[0];
    }catch(ProtegeReasonerException ex){
      throw new IOntologyError("Reasoner Problem",ex);
    }
    //return new IClass[0];
  }

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