Examples of InsertSizeMetricsCollector


Examples of picard.analysis.directed.InsertSizeMetricsCollector

    @Override protected void setup(final SAMFileHeader header, final File samFile) {
        IOUtil.assertFileIsWritable(OUTPUT);
        IOUtil.assertFileIsWritable(Histogram_FILE);

        //Delegate actual collection to InsertSizeMetricCollector
        multiCollector = new InsertSizeMetricsCollector(METRIC_ACCUMULATION_LEVEL, header.getReadGroups(), MINIMUM_PCT, Histogram_WIDTH, DEVIATIONS);
    }
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