Package fork.lib.bio.anno.genomic

Examples of fork.lib.bio.anno.genomic.LandscapeScoringStrand

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    }
   
   
   
public void writeToFile(File of)throws Exception{
    LandscapeScoringStrand ls= new LandscapeScoringStrand(
            new BarReader(ff).getLandscapeBuilder(),
            new BarReader(fr).getLandscapeBuilder(),
            new BedReader(anno).getGenomicRegionsBuilder()
            );
    ls.writeToBedFile(of);
}
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    }
   
   
   
public void writeToFile(File of)throws Exception{
    LandscapeScoringStrand ls= new LandscapeScoringStrand(
            new BarReader(fr).getLandscapeBuilder(),
            new BarReader(ff).getLandscapeBuilder(),
            new BedReader(anno).getGenomicRegionsBuilder()
            );
    ls.writeToBedFile(of);
}
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Related Classes of fork.lib.bio.anno.genomic.LandscapeScoringStrand

  • data.cerevisiae.inhouse.a_norm.NormRNASeq
  • data.cerevisiae.inhouse.a_score.ScoreRNAAnti
  • data.cerevisiae.inhouse.a_score.ScoreRNAGene
  • data.cerevisiae.inhouse.a_score.ScoreRNAGeneRead
  • data.cerevisiae.region.scan.LinkAntisense
  • data.cerevisiae.vanbakel2013.ScoreAntisense
  • data.cerevisiae.vanbakel2013.ScoreSense
  • data.human.inhouse.cuff.ScoreBoth
  • data.human.inhouse.score.ScoreRNAGene
  • data.human.test.trsc.ScoreMergeAgainstRNA
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