Examples of EAGLE

Examples of org.cytoscape.ClusterViz.internal.algorithm.EAGLE

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      }

      success = true;
      } else if (alg instanceof EAGLE)//
      {
        EAGLE objEagle = (EAGLE) alg;
        objEagle.setTaskMonitor(taskMonitor, network.getSUID());
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 1 of 3:Calculate all the maximal Clique...");
        clusters = objEagle.run(network, this.resultId);
        objEagle.getMaximalCliques(network, this.resultId);
        System.err.println("Finding clique: Time spent "
            + objEagle.getLastFindTime() + " ms.");
        if (interrupted)
          return;
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 2 of 3:Generating Complexes...");
        clusters = objEagle.EAGLEFinder(network, this.resultId);
        if (interrupted)
          return;
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 3 of 3: Drawing the Result Network...");
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Examples of org.cytoscape.ClusterViz.internal.algorithm.EAGLE

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        }

        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.MCODE ))
            alg1 = new MCODE(network.getSUID(), this.clusterUtil);
        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.EAGLE ))
            alg1 = new EAGLE(network.getSUID(), this.clusterUtil);
        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.FAGEC ))
            alg1 = new FAGEC(network.getSUID(), this.clusterUtil);
        this.clusterUtil.addNetworkAlgorithm(network.getSUID().longValue(), alg1);
       
/*      
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Examples of org.openpnp.model.eagle.xml.Eagle

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        });

        InputSource input = new InputSource(new FileInputStream("/Users/jason/Desktop/adafruit.lbr"));
        Source source = new SAXSource(xmlreader, input);

        Eagle eagle = (Eagle) unmarshaller.unmarshal(source);
        Drawing drawing = (Drawing) eagle.getCompatibilityOrDrawing().get(0);
        Library library = (Library) drawing.getLibraryOrSchematicOrBoard().get(0);
        Packages packages = library.getPackages();
        HashSet<Object> stuff = new HashSet<Object>();
       
        System.out.println("<openpnp-packages>");
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