Examples of org.cytoscape.ClusterViz.internal.algorithm.EAGLE

      }


      success = true;
      } else if (alg instanceof EAGLE)//
      {
        EAGLE objEagle = (EAGLE) alg;
        objEagle.setTaskMonitor(taskMonitor, network.getSUID());
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 1 of 3:Calculate all the maximal Clique...");
        clusters = objEagle.run(network, this.resultId);
        objEagle.getMaximalCliques(network, this.resultId);
        System.err.println("Finding clique: Time spent "
            + objEagle.getLastFindTime() + " ms.");
        if (interrupted)
          return;
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 2 of 3:Generating Complexes...");
        clusters = objEagle.EAGLEFinder(network, this.resultId);
        if (interrupted)
          return;
        taskMonitor.setProgress(0);
        taskMonitor
            .setStatusMessage("Step 3 of 3: Drawing the Result Network...");

        }


        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.MCODE ))
            alg1 = new MCODE(network.getSUID(), this.clusterUtil);
        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.EAGLE ))
            alg1 = new EAGLE(network.getSUID(), this.clusterUtil);
        if(currentParamsCopy.getAlgorithm().equals(ParameterSet.FAGEC ))
            alg1 = new FAGEC(network.getSUID(), this.clusterUtil);
        this.clusterUtil.addNetworkAlgorithm(network.getSUID().longValue(), alg1);
        
 /*

Related Classes of org.cytoscape.ClusterViz.internal.algorithm.EAGLE

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