Classes and Subpackages of picard.illumina

picard.illumina.CheckIlluminaDirectory
picard.illumina.CheckIlluminaDirectoryTest
picard.illumina.ClusterDataToSamConverter
picard.illumina.CollectIlluminaBasecallingMetrics
picard.illumina.CollectIlluminaBasecallingMetrics$IlluminaMetricCounts
picard.illumina.CollectIlluminaBasecallingMetricsTest
picard.illumina.CollectIlluminaLaneMetrics
picard.illumina.CollectIlluminaLaneMetrics$IlluminaLaneMetricsCollector
picard.illumina.CollectIlluminaSummaryMetrics
picard.illumina.CollectIlluminaSummaryMetrics$IlluminaSummaryMetrics
picard.illumina.CollectIlluminaSummaryMetricsTest
picard.illumina.ExtractIlluminaBarcodes
picard.illumina.ExtractIlluminaBarcodes$BarcodeMetric
picard.illumina.ExtractIlluminaBarcodes$PerTileBarcodeExtractor
picard.illumina.ExtractIlluminaBarcodes$PerTileBarcodeExtractor$BarcodeMatch
picard.illumina.ExtractIlluminaBarcodesTest
picard.illumina.IlluminaBasecallingMetrics
picard.illumina.IlluminaBasecallsConverter
picard.illumina.IlluminaBasecallsConverter$ClusterDataConverter
picard.illumina.IlluminaBasecallsConverter$ConvertedClusterDataWriter
picard.illumina.IlluminaBasecallsConverter$PriorityRunnable
picard.illumina.IlluminaBasecallsConverter$Tile
picard.illumina.IlluminaBasecallsConverter$TileProcessingRecord
picard.illumina.IlluminaBasecallsConverter$TileReadAggregator
picard.illumina.IlluminaBasecallsConverter$TileReader
picard.illumina.IlluminaBasecallsToFastq
picard.illumina.IlluminaBasecallsToFastq$ClusterToFastqRecordsForClusterConverter
picard.illumina.IlluminaBasecallsToFastq$FastqRecordsForCluster
picard.illumina.IlluminaBasecallsToFastq$FastqRecordsForClusterCodec
picard.illumina.IlluminaBasecallsToFastq$FastqRecordsWriter
picard.illumina.IlluminaBasecallsToFastqTest
picard.illumina.IlluminaBasecallsToSam
picard.illumina.IlluminaBasecallsToSam$Codec
picard.illumina.IlluminaBasecallsToSam$QueryNameComparator
picard.illumina.IlluminaBasecallsToSam$SAMFileWriterWrapper
picard.illumina.IlluminaBasecallsToSam$SAMRecordsForCluster
picard.illumina.IlluminaBasecallsToSamAdapterClippingTest
picard.illumina.IlluminaBasecallsToSamTest
picard.illumina.IlluminaLaneMetrics
picard.illumina.IlluminaLaneMetricsCollectorTest
picard.illumina.IlluminaPhasingMetrics
picard.illumina.LanePhasingMetricsCollector
picard.illumina.MarkIlluminaAdapters
picard.illumina.MarkIlluminaAdapters$CustomAdapterPair
picard.illumina.ReadStructureTest

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Subpackages of picard.illumina

All Classes in picard.illumina