Classes and Subpackages of net.sf.samtools

Subpackages of net.sf.samtools

net.sf.samtools.bamfilereader
net.sf.samtools.samfilereader
net.sf.samtools.samrecord
net.sf.samtools.util

All Classes in net.sf.samtools

net.sf.samtools.BAMFileWriter
net.sf.samtools.BAMIndexFactory
net.sf.samtools.BAMIndexMetaData
net.sf.samtools.BAMIndexer
net.sf.samtools.BinaryTagCodec
net.sf.samtools.CRAMFileReader
net.sf.samtools.CRAMFileReader$BAMQueryFilteringIterator
net.sf.samtools.CRAMIndexer
net.sf.samtools.CRAMIndexer$BAMIndexBuilder
net.sf.samtools.Cigar
net.sf.samtools.CigarElement
net.sf.samtools.CigarOperator
net.sf.samtools.FileTruncatedException
net.sf.samtools.MyReader
net.sf.samtools.ReferenceDiscovery
net.sf.samtools.SAMException
net.sf.samtools.SAMFileHeader
net.sf.samtools.SAMFileReader
net.sf.samtools.SAMFileReader$AssertableIterator
net.sf.samtools.SAMFileReader$ReaderImplementation
net.sf.samtools.SAMFileWriter
net.sf.samtools.SAMFileWriterFactory
net.sf.samtools.SAMFormatException
net.sf.samtools.SAMIterator
net.sf.samtools.SAMIterator$CramFileIterable
net.sf.samtools.SAMReadGroupRecord
net.sf.samtools.SAMRecord
net.sf.samtools.SAMRecordIterator
net.sf.samtools.SAMSequenceRecord
net.sf.samtools.SAMTextHeaderCodec
net.sf.samtools.SAMTextReader2
net.sf.samtools.SAMTextReader2$RecordIterator
net.sf.samtools.SAMTextWriter
net.sf.samtools.TagValueAndUnsignedArrayFlag

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