Classes and Subpackages of net.sf.cram

Subpackages of net.sf.cram

net.sf.cram.encoding
net.sf.cram.huffman
net.sf.cram.index
net.sf.cram.io
net.sf.cram.lossy
net.sf.cram.mask
net.sf.cram.readwrite
net.sf.cram.select
net.sf.cram.stats
net.sf.cram.structure

All Classes in net.sf.cram

net.sf.cram.AlignmentSliceQuery
net.sf.cram.BLOCK_PROTO
net.sf.cram.BLOCK_PROTO$SwapInputStream
net.sf.cram.Bam2Cram
net.sf.cram.Bam2Cram$Params
net.sf.cram.Coder
net.sf.cram.Coder$MyDataOutputStream
net.sf.cram.Cram2Bam
net.sf.cram.Cram2Bam$Params
net.sf.cram.Cram2BamRecordFactory
net.sf.cram.CramDataInputStream
net.sf.cram.CramDataOutputStream
net.sf.cram.CramNormalizer
net.sf.cram.CramProf
net.sf.cram.CramRecord
net.sf.cram.CramRecordCodec
net.sf.cram.CramTools
net.sf.cram.CramTools$LevelConverter
net.sf.cram.CramTools$Params
net.sf.cram.CramTools$ValidationStringencyConverter
net.sf.cram.Crambone
net.sf.cram.Crambone$Bam2CramTask
net.sf.cram.Crambone$Cram2BamTask
net.sf.cram.Crambone$Params
net.sf.cram.Crambone$Project
net.sf.cram.Crambone$Task
net.sf.cram.DataSeriesType
net.sf.cram.DataToDB
net.sf.cram.DecomposeBAM
net.sf.cram.DecomposeBAM$Out
net.sf.cram.DecomposeBAM$Params
net.sf.cram.EncodingID
net.sf.cram.EncodingKey
net.sf.cram.EncodingParams
net.sf.cram.FastqSAMFileWriter
net.sf.cram.Merge
net.sf.cram.Merge$MergedIterator
net.sf.cram.Merge$Params
net.sf.cram.Merge$RecordSource
net.sf.cram.ReadTag
net.sf.cram.ReadWrite
net.sf.cram.ReadWrite$CramHeader
net.sf.cram.ReferenceTracks
net.sf.cram.Sam2CramRecordFactory
net.sf.cram.SpotAssemblyTest
net.sf.cram.TestByteBufferUtils
net.sf.cram.TestReferenceTracks
net.sf.cram.Utils
net.sf.cram.Utils$SwapOutputStream
net.sf.cram.ValidateCramFile
net.sf.cram.ValidateCramFile$Params

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