List of stateSequence() Examples

Examples of stateSequence()

be.ac.ulg.montefiore.run.jahmm.ViterbiCalculator.stateSequence()
Returns a (clone of) the array containing the computed most likely state sequence. @return The state sequence; the i-th value of the array is the indexof the i-th state of the state sequence.
org.encog.ml.hmm.alog.ViterbiCalculator.stateSequence()

Examples of be.ac.ulg.montefiore.run.jahmm.ViterbiCalculator.stateSequence()

   * @param seq The sequence of symbols being evaluated
   * @return The most likely sequence of states to produce that sequence
   */
  public State[] viterbiPath(ArrayList<String> seq) {
    ViterbiCalculator vc = new ViterbiCalculator(taxo.obSeqWithBoundarySymbols(seq), this);
    int[] stateSequence = vc.stateSequence();
    State[] ms = new State[stateSequence.length];
    for (int i = 0; i < stateSequence.length; i++) {
      ms[i] = taxo.getState(stateSequence[i]);
    }
    return ms;

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Examples of org.encog.ml.hmm.alog.ViterbiCalculator.stateSequence()

  private boolean optimizeCluster(final HiddenMarkovModel hmm) {
    boolean modif = false;


    for (final MLDataSet obsSeq : this.sequnces.getSequences()) {
      final ViterbiCalculator vc = new ViterbiCalculator(obsSeq, hmm);
      final int states[] = vc.stateSequence();


      for (int i = 0; i < states.length; i++) {
        final MLDataPair o = obsSeq.get(i);


        if (this.clusters.cluster(o) != states[i]) {

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