for (int k = 0, n = permutations.size(); k < n; k++) {
candidate = (short[]) permutations.get(k);
// PermuterCombinatorTest.printPermutation(candidate);
// reorder the pixels given the candidate ordering
engine.reorderPixelColors(rgb, rgbCopy, currentOrder,
candidate, bases);
// score the new rgb int[] (in terms of what it would look like
// if used to create an image)
score = Score0.score(paramUtils, candidate, numParametersOnX,
rgbCopy, bestScore);