List of probability() Examples

Examples of probability()

cc.mallet.types.Multinomial.probability()
org.apache.commons.math.distribution.BinomialDistribution.probability()
org.apache.commons.math.distribution.BinomialDistributionImpl.probability()
For this distribution, X, this method returns P(X = x). @param x the value at which the PMF is evaluated. @return PMF for this distribution.
org.apache.commons.math.distribution.PoissonDistribution.probability()
org.apache.commons.math3.distribution.BinomialDistribution.probability()
{@inheritDoc}
org.apache.commons.math3.distribution.IntegerDistribution.probability()
For a random variable {@code X} whose values are distributed accordingto this distribution, this method returns {@code P(X = x)}. In other words, this method represents the probability mass function (PMF) for the distribution. @param x the point at which the PMF is evaluated @return the value of the probability mass function at {@code x}
org.apache.commons.math3.distribution.PoissonDistribution.probability()
{@inheritDoc}

Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

            int criticalValueHigh = numberOfTrials;
            double pTotal = 0;


            while (true) {
                double pLow = distribution.probability(criticalValueLow);
                double pHigh = distribution.probability(criticalValueHigh);


                if (pLow == pHigh) {
                    pTotal += 2 * pLow;
                    criticalValueLow++;
                    criticalValueHigh--;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueLow = 0;
                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;
                            criticalValueHigh--;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueLow = 0;
                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;
                            criticalValueHigh--;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueLow = 0;
                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;
                            criticalValueHigh--;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueLow = 0;
                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                    int criticalValueHigh = numberOfTrials;
                    double pTotal = 0;


                    while (true) {
                        double pLow = distribution.probability(criticalValueLow);
                        double pHigh = distribution.probability(criticalValueHigh);


                        if (pLow == pHigh) {
                            pTotal += 2 * pLow;
                            criticalValueLow++;
                            criticalValueHigh--;

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Examples of org.apache.commons.math3.distribution.BinomialDistribution.probability()

                int c_xj = idPWM.getMatrix()[i][j]; // count of residue at position j
                double p_xj = ((double) bGPWM.getMatrix()[i][j])/((double) bGPWM.getColumnSum(j));
                double bin_prob = 0.00;
                for(int trial = c_xj; trial <= m; trial++){
                    BinomialDistribution bnDistr = new BinomialDistribution(trial,p_xj);
                    bin_prob = bin_prob + bnDistr.probability(trial);
                    //int printbin = (m - c_xj)/20;
                    if(trial%10==0){
                        System.out.println("\t\t\tBinomial probability of "+ aminoA_symbols[i] + ", " + 
                                relative_positions[j] + " at iteration " + trial + " of " + m + " is " + 
                                   bin_prob);

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