Examples of org.openrdf.model.ValueFactory.createURI()

org.openrdf.model.ValueFactory.createURI()
Creates a new URI from the supplied string-representation. @param uri A string-representation of a URI. @return An object representing the URI. @throws IlllegalArgumentException If the supplied string does not resolve to a legal (absolute) URI.

    for (UNode<String> node : graph.nodes()) {
      BNode bn = factory.createBNode(moleculeID + "_" + node.index());
      nodeMap.put(node.index(), bn);
      moleculeRDF.add(factory.createStatement(moleculeURI, hasAtomURI, bn));
      moleculeRDF.add(factory.createStatement(bn, partOfURI, moleculeURI));
      moleculeRDF.add(factory.createStatement(bn, RDF.TYPE, factory.createURI(NAMESPACE + "atom/", node.label())));
    }
    for (ULink<String> link : graph.links()) {
      moleculeRDF.add(factory.createStatement(nodeMap.get(link.first().index()), bondURI, nodeMap.get(link.second().index())));
      moleculeRDF.add(factory.createStatement(nodeMap.get(link.second().index()), bondURI, nodeMap.get(link.first().index())));
    }

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  public void annotate(String label, int cluster) {
    ValueFactory f = conn.getValueFactory();
    
    Resource node = null;
    if(label.startsWith("http"))
      node = f.createURI(label);
    else
      return ; // we are not annotating literals
          
    URI pred = f.createURI("http://data2semantics.org/experiments/clusterAs");
    Literal val = f.createLiteral(cluster);

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    if(label.startsWith("http"))
      node = f.createURI(label);
    else
      return ; // we are not annotating literals
          
    URI pred = f.createURI("http://data2semantics.org/experiments/clusterAs");
    Literal val = f.createLiteral(cluster);
    try {
      conn.add(node,pred,val);
    } catch (RepositoryException e) {
      Global.log().warning("Failed to parse original RDF");

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    FileInputStream fis = new FileInputStream(workflow.file());
    String workflowMD5sum = DigestUtils.md5Hex(fis);
    long currentTimeMilis = System.currentTimeMillis();
    
    // Define all the URI's that we are going to (re)use
    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");

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    String workflowMD5sum = DigestUtils.md5Hex(fis);
    long currentTimeMilis = System.currentTimeMillis();
    
    // Define all the URI's that we are going to (re)use
    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");

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    long currentTimeMilis = System.currentTimeMillis();
    
    // Define all the URI's that we are going to (re)use
    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");

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    // Define all the URI's that we are going to (re)use
    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");
    
    URI valueURI = factory.createURI(NAMESPACE, "value");

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    // Define all the URI's that we are going to (re)use
    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");
    
    URI valueURI = factory.createURI(NAMESPACE, "value");

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    URI eURI = factory.createURI(PROV_NAMESPACE, "Entity");
    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");
    
    URI valueURI = factory.createURI(NAMESPACE, "value");
    
    URI agURI = factory.createURI(PROV_NAMESPACE, "Agent");

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    URI acURI = factory.createURI(PROV_NAMESPACE, "Activity");
    URI usedURI = factory.createURI(PROV_NAMESPACE, "used");
    URI wgbURI  = factory.createURI(PROV_NAMESPACE, "wasGeneratedBy");
    URI  genAtURI  = factory.createURI(PROV_NAMESPACE, "generatedAtTime");
    URI  startAtURI  = factory.createURI(PROV_NAMESPACE, "startedAtTime");
    URI  endAtURI  = factory.createURI(PROV_NAMESPACE, "endedAtTime");
    
    URI valueURI = factory.createURI(NAMESPACE, "value");
    
    URI agURI = factory.createURI(PROV_NAMESPACE, "Agent");
    URI watURI  = factory.createURI(PROV_NAMESPACE, "wasAttributedTo");

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