Examples of org.data2semantics.exp.utils.ResultsTable.newRow()

Class org.data2semantics.exp.utils.ResultsTable

Examples of org.data2semantics.exp.utils.ResultsTable.newRow()

org.data2semantics.exp.utils.ResultsTable.newRow()


      if (blankLabels) {
        ds.removeVertexAndEdgeLabels();
      }


      resTable.newRow("IGP");
      for (int it : iterationsIG) {
        KernelExperiment<GraphKernel> exp = new GraphKernelExperiment(new ECML2013IntersectionGraphPathKernel(it,1), seeds, parms, ds.getGraphs(), labels);


        System.out.println("Running IGP: " + it);
        exp.run();

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      if (blankLabels) {
        ds.removeVertexAndEdgeLabels();
      }


      resTable.newRow("IGW");
      for (int it : iterationsIG) {
        KernelExperiment<GraphKernel> exp = new GraphKernelExperiment(new ECML2013IntersectionGraphWalkKernel(it,1), seeds, parms, ds.getGraphs(), labels);


        System.out.println("Running IGW: " + it);
        exp.run();

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    //resTable.setManWU(0.05);
    
    
    ///*
    for (int it : iterations) {
      resTable.newRow("WL, it: " + it);
      MoleculeGraphExperiment<UGraph<String>> exp = new MoleculeGraphExperiment<UGraph<String>>(new WLUSubTreeKernel(it, true), seeds, svmParms, graphs, labels, evalFuncs);


      System.out.println("Running WL, it: " + it);
      exp.run();

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    //*/


    
    for (int d = 1; d < 4; d++) {
      for (int it : iterations2) {    
        resTable.newRow("WL RDF, " + d + ", " + it);
        
        RDFWLSubTreeKernel k = new RDFWLSubTreeKernel(it, d, false, true, true, false);
        
        RDFGraphKernelExperiment exp = new RDFGraphKernelExperiment(k, seeds, svmParms, ts, instances, labels, new ArrayList<Statement>(), evalFuncs);

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      System.out.println(resTable);
    }




    for (int d = 1; d < 4; d++) {
      resTable.newRow("WL RDF type, d " + d);
      for (int it : iterations2) {    


        RDFWLSubTreeSlashBurnKernel k = new RDFWLSubTreeSlashBurnKernel(it, d, false, true, true);
        k.setHubMap(GraphUtils.createRDFTypeHubMap(ts, false));

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    int[] hf = {0,1,2,3,4,5,6,7};


    for (int h : hf) {
      for (int i : depths) {      
        resTable.newRow("RDF WL NonSig " + h);
        for (int it : iterations2) {
          RDFWLSubTreeSlashBurnKernel k = new RDFWLSubTreeSlashBurnKernel(it, i, false, true, true);
          k.setHubMap(GraphUtils.createNonSigHubMap(nonSigDegreeHubs, h));


          //KernelExperiment<RDFFeatureVectorKernel> exp = new RDFLinearKernelExperiment(k, seeds, linParms, dataset, instances, target, blackList, evalFuncs);

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      System.out.println(resTable);
    }
    
    for (int h : hf) {
      for (int i : depths) {      
        resTable.newRow("RDF WL SB " + h);
        for (int it : iterations2) {
          RDFWLSubTreeSlashBurnKernel k = new RDFWLSubTreeSlashBurnKernel(it, i, false, true, true);
          k.setHubMap(GraphUtils.createHubMap(hubs, h));


          //KernelExperiment<RDFFeatureVectorKernel> exp = new RDFLinearKernelExperiment(k, seeds, linParms, dataset, instances, target, blackList, evalFuncs);

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      if (blankLabels) {
        ds.removeVertexAndEdgeLabels();
      }


      resTable.newRow("IGW");
      for (int it : iterationsIG) {
        KernelExperiment<GraphKernel> exp = new GraphKernelExperiment(new ECML2013IntersectionGraphWalkKernel(it,1), seeds, parms, ds.getGraphs(), labels);


        System.out.println("Running IGW: " + it);
        exp.run();

View Full Code Here

    }
    System.out.println(resTable);
     */


    for (int th : hubThs) {
      resTable.newRow("Hub Threshold: " + th);


      for (List<DTNode<String,String>> hubList : hubLists) {


        List<List<DTNode<String,String>>> newIN = new ArrayList<List<DTNode<String,String>>>();
        List<DTGraph<String,String>> newGs = GraphUtils.simplifyGraph3Way(graph3, GraphUtils.createHubMap(hubList, th), instanceNodes3, newIN);

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    resTable2.setDigits(3);


    double[] fracs = {0.25, 0.5, 0.75, 1.0, 1.5, 2.0};


    for (double frac : fracs) {
      resTable2.newRow("Fraction: " + frac);
      
      List<DTGraph<String,String>> ihDepth = InstanceHelper.getInstances(graph4, instanceNodes4, target, InstanceHelper.Method.DEPTH, (int) Math.round(frac*avg), 4, true);  
      
      exp = new MoleculeGraphExperiment<DTGraph<String,String>>(new WLSubTreeKernel(it, true, forward), seeds, svmParms, ihDepth, target, evalFuncs);

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