Examples of open()

Examples of org.gvt.gui.CompartmentQueryParamWithEntitiesDialog.open()

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        }

        //open dialog
        CompartmentQueryParamWithEntitiesDialog dialog =
      new CompartmentQueryParamWithEntitiesDialog(main);
        options = dialog.open(options);

        if ( !options.isCancel() )
    {
      options.setCancel(true);
    }
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Examples of org.gvt.gui.ExportToSIFDialog.open()

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      main.getOwlModel().getLevel());

    ExportToSIFDialog dialog = new ExportToSIFDialog(main.getShell(),
      possibleRuleTypes, ruleTypes);

    if (dialog.open() && !ruleTypes.isEmpty())
    {
      SIFGraph sif = new SIFGraph(model, ruleTypes);

      int nodenum = sif.getNodes().size();
      int edgenum = sif.getEdges().size();
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Examples of org.gvt.gui.GOIofSIFParameterDialog.open()

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      siffile,
      genesfile,
      limit,
      directed);

    if (dialog.open())
    {
      siffile = dialog.getSiffile();
      genesfile = dialog.getGenefile();
      limit = dialog.getLimit();
      directed = dialog.getDirected();
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Examples of org.gvt.gui.GoIQueryParamDialog.open()

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        //if action is called from PopupMenu
        if (useSelection)
        {
            //open dialog
            GoIQueryParamDialog dialog = new GoIQueryParamDialog(this.main);
            options = dialog.open(options);

            //Return if Cancel was pressed
            if ( !options.isCancel() )
            {
                options.setCancel(true);
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Examples of org.gvt.gui.GoIQueryParamWithEntitiesDialog.open()

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        else
        {
            //open dialog
            GoIQueryParamWithEntitiesDialog dialog =
                new GoIQueryParamWithEntitiesDialog(main);
            options = dialog.open(options);

            if ( !options.isCancel() )
            {
                options.setCancel(true);
            }
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Examples of org.gvt.gui.ItemSelectionDialog.open()

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        500,
        "Pathway Selection Dialog",
        "Select pathways to view",
        allNames, pathways, true, true, null);

      dialog.open();

      if (dialog.isCancelled())
      {
        pathways = null;
        return;
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Examples of org.gvt.gui.NeighborhoodQueryParamDialog.open()

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    if (useSelection)
    {
      //open dialog
      NeighborhoodQueryParamDialog dialog =
        new NeighborhoodQueryParamDialog(this.main);
      options = dialog.open(options);

      //Return if Cancel was pressed
      if ( !options.isCancel() )
      { 
        options.setCancel(true);
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Examples of org.gvt.gui.NeighborhoodQueryParamWithEntitiesDialog.open()

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    //if action is called from TopMenuBar
    else
    {
      //open dialog
      NeighborhoodQueryParamWithEntitiesDialog dialog = new NeighborhoodQueryParamWithEntitiesDialog(main);
      options = dialog.open(options);

      if ( !options.isCancel() )
      { 
        options.setCancel(true);
      }
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Examples of org.gvt.gui.PoIQueryParamWithEntitiesDialog.open()

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        Set<Node> sourceNodes = new HashSet<Node>();
        Set<Node> targetNodes = new HashSet<Node>();

        //open dialog
        PoIQueryParamWithEntitiesDialog dialog = new PoIQueryParamWithEntitiesDialog(main);
        options = dialog.open(options);

        if ( !options.isCancel() )
    {
      options.setCancel(true);
    }
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Examples of org.gvt.gui.StringInputDialog.open()

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        StringInputDialog dialog = new StringInputDialog(main.getShell(), "Rename Pathway",
          "Enter new name", tab.getText());

        dialog.setSelectText(true);

        newname = dialog.open();
      }
      while(newname != null && !newname.equals(tab.getText()) &&
        (main.getAllPathwayNames().contains(newname) ||
        main.getOpenTabNames().contains(newname)));
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