Package net.sf.cram.stats.CompressionHeaderFactory

Examples of net.sf.cram.stats.CompressionHeaderFactory.HuffmanParamsCalculator.bitLens()

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    }

    cal.calculate();

    CanonicalHuffmanIntegerCodec c = new CanonicalHuffmanIntegerCodec(
        cal.values(), cal.bitLens());
    long time6 = System.nanoTime() ;

    ByteArrayOutputStream baos = new ByteArrayOutputStream();
    DefaultBitOutputStream bos = new DefaultBitOutputStream(baos);
   
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    iterator.close();
    r.close();
    c.calculate();

    int[] values = c.values();
    int[] lens = c.bitLens();
    System.out.println(Arrays.toString(values));
    System.out.println(Arrays.toString(lens));

    EncodingParams params = HuffmanIntegerEncoding.toParam(values, lens);
    HuffmanIntegerEncoding e = new HuffmanIntegerEncoding();
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      cal.add(i);
    cal.calculate();

    // CanonicalHuffmanByteCodec helper = new CanonicalHuffmanByteCodec(
    // cal.valuesAsBytes(), cal.bitLens());
    HelperByte helper = new HelperByte(cal.valuesAsBytes(), cal.bitLens());
    long time6 = System.nanoTime();

    ByteArrayOutputStream baos = new ByteArrayOutputStream();
    DefaultBitOutputStream bos = new DefaultBitOutputStream(baos);
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    cal.calculate();

    // CanonicalHuffmanIntegerCodec helper = new
    // CanonicalHuffmanIntegerCodec(
    // cal.values(), cal.bitLens());
    Helper helper = new Helper(cal.values(), cal.bitLens());
    long time6 = System.nanoTime();

    ByteArrayOutputStream baos = new ByteArrayOutputStream();
    DefaultBitOutputStream bos = new DefaultBitOutputStream(baos);
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