Examples of edgeSet()

Examples of cascading.flow.planner.graph.ElementGraph.edgeSet()

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    ElementGraph next = parentIterator.next();

    if( hasNext() )
      {
      maskedElements.addAll( next.vertexSet() );
      maskedScopes.addAll( next.edgeSet() ); // catches case with no elements on path

      return next;
      }

    maskedElements.removeAll( next.vertexSet() );
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Examples of cascading.flow.planner.graph.ElementGraph.edgeSet()

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      return next;
      }

    maskedElements.removeAll( next.vertexSet() );
    maskedScopes.removeAll( next.edgeSet() );

    return new ElementMaskSubGraph( parentIterator.getElementGraph(), maskedElements, maskedScopes );
    }

  @Override
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Examples of cascading.flow.planner.process.FlowNodeGraph.edgeSet()

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      vertexMap.put( flowNode, vertex );
      }

    LinkedList<ProcessGraph.ProcessEdge> processedEdges = new LinkedList<>();

    for( ProcessGraph.ProcessEdge processEdge : nodeGraph.edgeSet() )
      {
      if( processedEdges.contains( processEdge ) )
        continue;

      FlowNode edgeTargetFlowNode = nodeGraph.getEdgeTarget( processEdge );
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Examples of cu.repsystestbed.graphs.FeedbackHistoryGraph.edgeSet()

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      }
    }
    else
    {
      FeedbackHistoryGraph feedbackHistoryGraphTransitive = ((FeedbackHistoryGraph)this.m_graph2Listen).getTransitiveClosureGraph();
      Set<FeedbackHistoryGraphEdge> edges = feedbackHistoryGraphTransitive.edgeSet();
      for(FeedbackHistoryGraphEdge edge : edges)
      {
        Agent src = (Agent)edge.src;
        Agent sink = (Agent)edge.sink;
        m_graph2Output.addVertex(src);
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Examples of cu.repsystestbed.graphs.Graph.edgeSet()

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    {
      /*
       * Find the transitive closure edges of the input graph and add them to the output grph
       */
      Graph graphTransitive = ((Graph)this.m_graph2Listen).getTransitiveClosureGraph();
      for(TestbedEdge edge : (Set<TestbedEdge>)graphTransitive.edgeSet())
      {
        Agent src = (Agent)edge.src;
        Agent sink = (Agent)edge.sink;
        m_graph2Output.addVertex(src);
        m_graph2Output.addVertex(sink);
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Examples of cu.repsystestbed.graphs.ReputationGraph.edgeSet()

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      }
     
    }else
    {
      ReputationGraph ReputationGraphTransitive = ((ReputationGraph)this.m_graph2Listen).getTransitiveClosureGraph();
      Set<ReputationEdge> edges = ReputationGraphTransitive.edgeSet();
      for(ReputationEdge edge : edges)
      {
        Agent src = (Agent)edge.src;
        Agent sink = (Agent)edge.sink;
        m_graph2Output.addVertex(src);
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Examples of org._3pq.jgrapht.UndirectedGraph.edgeSet()

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      int numEdgePtls = 0;
      for (Iterator factorIt = mdl.factors ().iterator (); factorIt.hasNext ();) {
        Factor factor =  (Factor) factorIt.next ();
        if (factor.varSet ().size() == 2) numEdgePtls++;
      }
      assertEquals (numEdgePtls, g.edgeSet ().size ());

      // check that the neighbors of each vertex contain at least some of what they're supposed to
      Iterator it = vertices.iterator ();
      while (it.hasNext ()) {
        Variable var = (Variable) it.next ();
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Examples of org.broadinstitute.gatk.tools.walkers.haplotypecaller.readthreading.HaplotypeGraph.edgeSet()

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   @Test(dataProvider="buildByStringDataProvider")
   public void testBuildByString(final String string, final int kmerSize, final int vertexCount, final int edgeCount) {
       final HaplotypeGraph g = new HaplotypeGraph(string);
       Assert.assertEquals(g.getKmerSize(),kmerSize,g.toString());
       Assert.assertEquals(g.vertexSet().size(),vertexCount,g.toString());
       Assert.assertEquals(g.edgeSet().size(),edgeCount,g.toString());
   }

   @Test(dataProvider="equalTestDataProvider")
   public void testEquals(final HaplotypeGraph one, final HaplotypeGraph two, final boolean expected) {
      Assert.assertEquals(one.equals(two),expected);
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Examples of org.jgrapht.graph.SimpleDirectedGraph.edgeSet()

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          {
            Object o1 = graph.insertVertex(parent,((Node)o).m_name, ((Node)o).m_name, 20, 20, 80, 30);
            jgraphVertices.put(((Node)o).m_name, o1);
           
          }
          for(Object o : g.edgeSet())
          {
            Node src = ((TEdge)o).m_src;
            Node sink = ((TEdge)o).m_sink;
            graph.insertEdge(parent, null, "edge", jgraphVertices.get(src.m_name), jgraphVertices.get(sink.m_name));
          }
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