List of createOntology() Examples

Examples of createOntology()

com.hp.hpl.jena.ontology.OntModel.createOntology()

Answer a resource that represents an ontology description node in this model. If a resource with the given URI exists in the model, it will be re-used. If not, a new one is created in the writable sub-model of the ontology model.
@param uri The URI for the ontology node. Conventionally, this corresponds to the base URIof the document itself. @return An Ontology resource.
com.hp.hpl.jena.ontology.impl.OntModelImpl.createOntology()

Answer a resource that represents an ontology description node in this model. If a resource with the given uri exists in the model, it will be re-used. If not, a new one is created in the updateable sub-graph of the ontology model.
@param uri The uri for the ontology node. Conventionally, this corresponds to the base URIof the document itself. @return An Ontology resource.
org.biojava.ontology.OntologyFactory.createOntology()
Creates a new Ontology @param name the name to give the ontology @param description the description for the ontology @return an Ontology @throws NullPointerException if either name or description are null @throws OntologyException if the ontology could not be created
org.mmisw.orrclient.IOrrClient.createOntology()
Prepares a new ontology with the given information. The resulting ontology will be stored in a temporary space. A subsequent call to {@link #registerOntology(CreateOntologyResult,LoginResult)}will register the ontology. @param createOntologyInfo @return
org.mmisw.orrclient.core.vine.MappingOntologyCreator.createOntology()
org.semanticweb.owl.model.OWLOntologyManager.createOntology()
Creates a new (empty) ontology that has the specified ontology URI. @param ontologyURI The URI of the ontology to be created. The ontology URI will be mapped to a physical URI inorder to determine the type of ontology factory that will be used to create the ontology. If this mapping is null then a default (in memory) implementation of the ontology will most likely be created. @return The newly created ontology, or if an ontology with the specified URI already exists then this existingontology will be returned. @throws OWLOntologyCreationException If the ontology could not be created.
org.semanticweb.owlapi.model.OWLOntologyManager.createOntology()
Creates a new (empty) ontology that does not have an ontology IRI (and therefore does not have a version IRI). A document IRI will automatically be generated. @return The newly created ontology @throws OWLOntologyCreationException if there was a problem creating the ontology

Examples of com.hp.hpl.jena.ontology.OntModel.createOntology()

    // The new OntModel that will contain the pre-existing attributes (if any),
    // plus the new and updated attributes:
    final OntModel newOntModel = ModelFactory.createOntologyModel(model.getSpecification(), model);
    // Note: previously, newOntModel = new OwlModel(model); but the OwlModel extension was not used
    // in any particular way, so the new call should be equivalent.
    final Ontology ont_ = newOntModel.createOntology(base_);
    if ( log.isDebugEnabled() ) {
      log.debug("New ontology created with namespace " + ns_ + " base " + base_);
    }
    newOntModel.setNsPrefix("", ns_);

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Examples of com.hp.hpl.jena.ontology.OntModel.createOntology()


    
    // The new OntModel that will contain the pre-existing attributes (if any),
    // plus the new and updated attributes:
    final OntModel newOntModel = _createOntModel(model);
    final Ontology ont_ = newOntModel.createOntology(base_);
    log.info("New ontology created with namespace " + ns_ + " base " + base_);
    newOntModel.setNsPrefix("", ns_);
    
    // set preferred prefixes:
    Map<String, String> preferredPrefixMap = MdHelper.getPreferredPrefixMap();

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Examples of com.hp.hpl.jena.ontology.OntModel.createOntology()


    
    // The new OntModel that will contain the pre-existing attributes (if any),
    // plus the new and updated attributes:
    final OntModel newOntModel = _createOntModel(model);
    final Ontology ont_ = newOntModel.createOntology(base_);
    log.info("New ontology created with namespace " + ns_ + " base " + base_);
    newOntModel.setNsPrefix("", ns_);
    
    // set preferred prefixes:
    Map<String, String> preferredPrefixMap = MdHelper.getPreferredPrefixMap();

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Examples of com.hp.hpl.jena.ontology.impl.OntModelImpl.createOntology()

    for ( String uri : preferredPrefixMap.keySet() ) {
      String prefix = preferredPrefixMap.get(uri);
      newOntModel.setNsPrefix(prefix, uri);
    }


    newOntModel.createOntology(base_);
    if ( log.isDebugEnabled() ) {
      log.debug("New ontology created with namespace " + ns_ + " base " + base_);
    }


    return newOntModel;

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Examples of org.biojava.ontology.OntologyFactory.createOntology()

            )
  throws ParseException, IOException {
    
     try {
       OntologyFactory factory = OntoTools.getDefaultFactory();
       Ontology ontology = factory.createOntology(ontoName, ontoDescription);
       
           OboFileParser parser = new OboFileParser();
           
           OboFileEventListener handler = new OboFileHandler(ontology);

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Examples of org.mmisw.orrclient.IOrrClient.createOntology()

    createOntologyInfo.setDataCreationInfo(dataCreationInfo);
    createOntologyInfo.setHostingType(HostingType.RE_HOSTED);
    Map<String, String> metadataValues = _getMetadataValues(prefix);
    createOntologyInfo.setMetadataValues(metadataValues);
    
    CreateOntologyResult createOntologyResult = orrClient.createOntology(createOntologyInfo);
    assertNull("No error in createOntologyResult", createOntologyResult.getError());
    log.debug("createOntologyResult = " +createOntologyResult);
    
    
    log.info("=============== registerOntology =================");

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Examples of org.mmisw.orrclient.core.vine.MappingOntologyCreator.createOntology()

      log.error(error, e);
      createVocabResult.setError(error);
      return;
    }
    
    ontCreator.createOntology(createVocabResult);
  }


  
  public RegisterOntologyResult registerOntology(CreateOntologyResult createOntologyResult, LoginResult loginResult) {
    RegisterOntologyResult registerOntologyResult = null;

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Examples of org.semanticweb.owl.model.OWLOntologyManager.createOntology()

      OWLOntologyManager tboxMgr = OWLManager.createOWLOntologyManager();
      OWLOntologyManager aboxMgr = OWLManager.createOWLOntologyManager();
      
      // Create two ontologies: Tbox and Abox
      OWLOntology tbox = tboxMgr.createOntology(tboxURI);
      OWLOntology abox = aboxMgr.createOntology(aboxURI);
    
      Set<OWLLogicalAxiom> axioms = ontology.getLogicalAxioms();
      logger.info("Number of logical axioms: "+axioms.size());
      for (OWLLogicalAxiom axiom : axioms){
        if (axiom instanceof OWLIndividualAxiom){

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Examples of org.semanticweb.owl.model.OWLOntologyManager.createOntology()

      OWLOntologyManager tboxMgr = OWLManager.createOWLOntologyManager();
      OWLOntologyManager aboxMgr = OWLManager.createOWLOntologyManager();
      
      // Create two ontologies: Tbox and Abox
      OWLOntology tbox = tboxMgr.createOntology(tboxURI);
      OWLOntology abox = aboxMgr.createOntology(aboxURI);
    
      Set<OWLLogicalAxiom> axioms = ontology.getLogicalAxioms();
      logger.info("Number of logical axioms: "+axioms.size());
      for (OWLLogicalAxiom axiom : axioms){
        if (axiom instanceof OWLClassAssertionAxiom){

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Examples of org.semanticweb.owlapi.model.OWLOntologyManager.createOntology()


    @Test
    public void testCreateOntologyChangeEquals()
            throws OWLOntologyCreationException {
        OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
        OWLOntology ontology = manager.createOntology();
        OWLOntologyID ontologyID = ontology.getOntologyID();
        AddAxiomData addAxiomData = new AddAxiomData(mockAxiom);
        OWLOntologyChangeRecord changeRecord = new OWLOntologyChangeRecord(
                ontologyID, addAxiomData);
        OWLOntologyChange change = changeRecord.createOntologyChange(manager);

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