Examples of acumMappingQuality()

Examples of org.bioinfo.ngs.qc.qualimap.beans.SingleReadData.acumMappingQuality()

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                // aligned bases
                readData.numberOfMappedBases++;

                if (nucleotide != '-' && nucleotide != 'N') {
                    // mapping quality
                    readData.acumMappingQuality(relative, mappingQuality);
                    // base stats
                    readData.acumBase(relative, nucleotide);
                }

            }
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