Examples of UnorderedBipartiteCavityMatcherMinCostFlow


Examples of bgu.bio.algorithms.graphs.hsa.matchers.UnorderedBipartiteCavityMatcherMinCostFlow

    // 2, 0: -23.0 *** Cost: -16.0, Matching: (0, 2), (1, 3),
    // 2, 1: -49.0 *** Cost: -46.0, Matching: (0, 2), (1, 0),
    // 2, 2: -32.0 *** Cost: -25.0, Matching: (0, 1), (1, 0),
    // 2, 3: -49.0 *** Cost: -46.0, Matching: (0, 2), (1, 0),

    BipartiteCavityMatcher matcher = new UnorderedBipartiteCavityMatcherMinCostFlow(
        3, 4);

    matcher.setAllMatchCost(0, -4, -3, -20, -2);
    matcher.setAllMatchCost(1, -30, -4, -4, -4);
    matcher.setAllMatchCost(2, -4, 4, 4, 4);

    matcher.setAllDelCostX(5, 5, 2);
    matcher.setAllDelCostY(5, 1, 5, 1);

    checkCavityMatchings(matcher);

    // check forced matchings:
    double inf = Double.POSITIVE_INFINITY;
    matcher.setDelCostX(0, inf);
    matcher.setDelCostY(2, inf);

    System.out.println("\n");
    System.out.println("Checking forced match of x0 and y2: ");

    checkCavityMatchings(matcher);

    matcher.setDelCostY(2, 5);
    matcher.setDelCostY(0, inf);

    System.out.println("\n");
    System.out.println("Checking forced match of x0 and y0: ");
    checkCavityMatchings(matcher);

    matcher.setDelCostX(0, 5);
    matcher.setDelCostY(0, 5);

    System.out.println("\n");
    System.out.println("Checking forced match of x2: ");
    matcher.setDelCostX(2, inf);
    checkCavityMatchings(matcher);

    System.out.println("\n");
    System.out.println("Checking group replacement: ");

    matcher = new UnorderedBipartiteCavityMatcherMinCostFlow(4, 3);
    matcher.setAllMatchCost(0, -4, -30, -4);
    matcher.setAllMatchCost(1, -3, -4, 4);
    matcher.setAllMatchCost(2, -20, -4, 4);
    matcher.setAllMatchCost(3, -2, -4, 4);

    matcher.setAllDelCostX(5, 1, 5, 1);
    matcher.setAllDelCostY(5, 5, 2);

    checkCavityMatchings(matcher);
  }
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Examples of bgu.bio.algorithms.graphs.hsa.matchers.UnorderedBipartiteCavityMatcherMinCostFlow

    // 2, 0: -23.0 *** Cost: -16.0, Matching: (0, 2), (1, 3),
    // 2, 1: -49.0 *** Cost: -46.0, Matching: (0, 2), (1, 0),
    // 2, 2: -32.0 *** Cost: -25.0, Matching: (0, 1), (1, 0),
    // 2, 3: -49.0 *** Cost: -46.0, Matching: (0, 2), (1, 0),

    BipartiteCavityMatcher matcher = new UnorderedBipartiteCavityMatcherMinCostFlow(
        3, 4);

    matcher.setAllMatchCost(0, -4, -3, -20, -2);
    matcher.setAllMatchCost(1, -30, -4, -4, -4);
    matcher.setAllMatchCost(2, -4, 4, 4, 4);

    matcher.setAllDelCostX(5, 5, 2);
    matcher.setAllDelCostY(5, 1, 5, 1);

    checkCavityMatchings(matcher);

    // check forced matchings:
    double inf = Double.POSITIVE_INFINITY;
    matcher.setDelCostX(0, inf);
    matcher.setDelCostY(2, inf);

    System.out.println("\n");
    System.out.println("Checking forced match of x0 and y2: ");

    checkCavityMatchings(matcher);

    matcher.setDelCostY(2, 5);
    matcher.setDelCostY(0, inf);

    System.out.println("\n");
    System.out.println("Checking forced match of x0 and y0: ");
    checkCavityMatchings(matcher);

    matcher.setDelCostX(0, 5);
    matcher.setDelCostY(0, 5);

    System.out.println("\n");
    System.out.println("Checking forced match of x2: ");
    matcher.setDelCostX(2, inf);
    checkCavityMatchings(matcher);

    System.out.println("\n");
    System.out.println("Checking group replacement: ");

    matcher = new UnorderedBipartiteCavityMatcherMinCostFlow(4, 3);

    matcher.setAllMatchCost(0, -4, -30, -4);
    matcher.setAllMatchCost(1, -3, -4, 4);
    matcher.setAllMatchCost(2, -20, -4, 4);
    matcher.setAllMatchCost(3, -2, -4, 4);

    matcher.setAllDelCostX(5, 1, 5, 1);
    matcher.setAllDelCostY(5, 5, 2);

    checkCavityMatchings(matcher);
  }
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