Package ucar.nc2.iosp.hdf5

Examples of ucar.nc2.iosp.hdf5.H5header$MessageType


  @Override
  protected void applyRuleResultRecord(RuleResultType data, RuleResultRecord record) {
    data.setResult(mapRuleResult(record.getResult()));

        for (Message message : record.getMessages()) {
            MessageType node = data.addNewMessage();

            String context = message.getContext();
            if (context == null) {
              node.setStringValue(message.getText());
            } else {
              node.setStringValue(new StringBuilder()
                .append(context)
                .append(": ")
                .append(message.getText()).toString());
            }
            node.setSeverity(mapMessageSeverity(message.getSeverity()));
        }
  }
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  @Override
  protected void applyRuleResultRecord(RuleResultType data, RuleResultRecord record) {
    data.setResult(mapRuleResult(record.getResult()));

        for (Message message : record.getMessages()) {
            MessageType node = data.addNewMessage();

            String context = message.getContext();
            if (context == null) {
              node.setStringValue(message.getText());
            } else {
              node.setStringValue(new StringBuilder()
                .append(context)
                .append(": ")
                .append(message.getText()).toString());
            }
            node.setSeverity(mapMessageSeverity(message.getSeverity()));
        }
  }
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    public PrimitiveEncoderMetadataSet()
    {
        boolean streamed = false;
        // TEXT based - Classes Based
        MessageType msgType = MessageType.TEXT;
        register(Boolean.class,BooleanEncoder.class,msgType,streamed);
        register(Byte.class,ByteEncoder.class,msgType,streamed);
        register(Character.class,CharacterEncoder.class,msgType,streamed);
        register(Double.class,DoubleEncoder.class,msgType,streamed);
        register(Float.class,FloatEncoder.class,msgType,streamed);
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    public PrimitiveDecoderMetadataSet()
    {
        boolean streamed = false;
        // TEXT based - Classes Based
        MessageType msgType = MessageType.TEXT;
        register(Boolean.class,BooleanDecoder.class,msgType,streamed);
        register(Byte.class,ByteDecoder.class,msgType,streamed);
        register(Character.class,CharacterDecoder.class,msgType,streamed);
        register(Double.class,DoubleDecoder.class,msgType,streamed);
        register(Float.class,FloatDecoder.class,msgType,streamed);
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    this.handleQCInformation();

    this.ncFile.addAttribute( null, qcFlagsAtt );

    // Add some general metadata in global attributes.
    this.ncFile.addAttribute( null, new Attribute( "title",
                                                   new StringBuffer("NGDC archived ")
                                                   .append( datasetIdAtt.getStringValue())
                                                   .append( " data with start time ")
                                                   .append( startDateAtt.getStringValue())
                                                   .toString()));
    this.ncFile.addAttribute( null, new Attribute( "Convention", _Coordinate.Convention));

    // Add some THREDDS specific metadata in global attributes.
    this.ncFile.addAttribute( null, new Attribute( "thredds_creator", "DOD/USAF/SMC > Space and Missile Systems Center (SMC), U.S. Air Force, U.S. Department of Defense"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_contributor", "DOC/NOAA/NESDIS/NGDC > National Geophysical Data Center, NESDIS, NOAA, U.S. Department of Commerce"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_contributor_role", "archive"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_publisher", "DOC/NOAA/NESDIS/NGDC > National Geophysical Data Center, NESDIS, NOAA, U.S. Department of Commerce"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_publisher_url", "http://dmsp.ngdc.noaa.gov/"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_publisher_email", "ngdc.dmsp@noaa.gov"));
    this.ncFile.addAttribute( null, new Attribute( "thredds_summary",
                                                   new StringBuffer("This dataset contains data from the DMSP ").append( spacecraftIdAtt.getStringValue())
                                                   .append( " satellite OLS instrument and includes both visible smooth and thermal smooth imagery with 2.7km resolution.")
                                                   .append( " The start time for this data is ").append( startDateAtt.getStringValue())
                                                   .append( " and the northerly equatorial crossing longitude is ").append( startLongitudeAtt.getNumericValue())
                                                   .append( ".  The DMSP satellite is a polar-orbiting satellite crossing the equator, depending on the satellite, at either dawn/dusk or noon/midnight.")
                                                   .append( " This data is in the NOAA/NGDC DMSP archive format.")
                                                   .toString()));
    this.ncFile.addAttribute( null, new Attribute( "thredds_history", ""));
    this.ncFile.addAttribute( null, new Attribute( "thredds_timeCoverage_start", startDateAtt.getStringValue()));
    this.ncFile.addAttribute( null, new Attribute( "thredds_timeCoverage_end", endDateAtt.getStringValue()));
    this.ncFile.addAttribute( null, new Attribute( "thredds_geospatialCoverage",
                                                   new StringBuffer("Polar orbit with northerly equatorial crossing at longitude ")
                                                   .append( ascendingNodeAtt.getNumericValue()).append( ".")
                                                   .toString()));

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   * @throws IOException if any problems reading the file (or validating the file).
   */
  private void handleFileInformation()
          throws IOException
  {
    fileIdAtt = new Attribute( this.fileIdAttName,
                               (String) headerInfo.get( HeaderInfoTitle.FILE_ID.toString() ) );
    datasetIdAtt = new Attribute( this.datasetIdAttName,
                                  (String) headerInfo.get( HeaderInfoTitle.DATA_SET_ID.toString() ) );
    recordSizeInBytes = Integer.parseInt( (String) headerInfo.get( HeaderInfoTitle.RECORD_BYTES.toString() ) );
    numRecords = Integer.parseInt( (String) headerInfo.get( HeaderInfoTitle.NUM_RECORDS.toString() ) );
    numHeaderRecords = Integer.parseInt( (String) headerInfo.get( HeaderInfoTitle.NUM_HEADER_RECORDS.toString() ) );
    numDataRecords = Integer.parseInt( (String) headerInfo.get( HeaderInfoTitle.NUM_DATA_RECORDS.toString() ) );
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   * @throws IOException if any problems reading the file (or validating the file).
   */
  private void handleProcessingInformation()
          throws IOException
  {
    suborbitHistoryAtt = new Attribute( this.suborbitHistoryAttName,
                                        (String) headerInfo.get( HeaderInfoTitle.SUBORBIT_HISTORY.toString() ) );
    processingSystemAtt = new Attribute( this.processingSystemAttName,
                                         (String) headerInfo.get( HeaderInfoTitle.PROCESSING_SYSTEM.toString() ) );
    String processingDateString = (String) headerInfo.get( HeaderInfoTitle.PROCESSING_DATE.toString() );
    try
    {
      processingDate = DateFormatHandler.ALT_DATE_TIME.getDateFromDateTimeString( processingDateString );
    }
    catch ( ParseException e )
    {
      throw new IOException( "Invalid DMSP file: processing date string <" + processingDateString + "> not parseable: " + e.getMessage() );
    }
    processingDateAtt = new Attribute(
            this.processingDateAttName,
            DateFormatHandler.ISO_DATE_TIME.getDateTimeStringFromDate( processingDate ) );
  }
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  /**
   * Parse the satellite information from the header.
   */
  private void handleSatelliteInformation()
  {
    spacecraftIdAtt = new Attribute(
            this.spacecraftIdAttName,
            (String) headerInfo.get( HeaderInfoTitle.SPACECRAFT_ID.toString() ) );
    noradIdAtt = new Attribute(
            this.noradIdAttName,
            (String) headerInfo.get( HeaderInfoTitle.NORAD_ID.toString() ) );
  }
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    }
    catch ( ParseException e )
    {
      throw new IOException( "Invalid DMSP file: start date/time string <" + startDateTimeUTC + "> not parseable: " + e.getMessage() );
    }
    this.startDateAtt = new Attribute( this.startDateAttName,
                                       DateFormatHandler.ISO_DATE_TIME.getDateTimeStringFromDate( this.startDate));

    // Read the end date UTC information.
    time = (String) headerInfo.getHeaderInfoTitle.END_TIME_UTC.toString());
    String endDateTimeUTC = (String) headerInfo.getHeaderInfoTitle.END_DATE_UTC.toString())
                            + "T" + time.substring( 0, time.indexOf( '.')+4)
                            + "GMT";
    try
    {
      this.endDate = DateFormatHandler.ISO_DATE_TIME.getDateFromDateTimeString( endDateTimeUTC);
    }
    catch ( ParseException e )
    {
      throw new IOException( "Invalid DMSP file: end date/time string <" + endDateTimeUTC + "> not parseable: " + e.getMessage() );
    }
    this.endDateAtt = new Attribute( this.endDateAttName,
                                       DateFormatHandler.ISO_DATE_TIME.getDateTimeStringFromDate( this.endDate));

    // Read the local start/end date/time
    this.startDateLocalAtt = new Attribute( this.startDateLocalAttName,
                                            (String) HeaderInfoTitle.START_DATE_LOCAL.toString());
    this.startTimeLocalAtt = new Attribute( this.startTimeLocalAttName,
                                            (String) HeaderInfoTitle.START_TIME_LOCAL.toString());

    // Read the start latitude/longitude information.
    String startLatLon = (String) headerInfo.getHeaderInfoTitle.START_LAT_LON.toString());
    String[] latLon = startLatLon.split( " ");
    Double lat, lon;
    if ( latLon.length != 2) throw new IOException( "Invalid DMSP file: start lat/lon <" + startLatLon + "> invalid.");
    try
    {
      lat = Double.valueOf( latLon[0]);
      lon = Double.valueOf( latLon[1]);
    }
    catch ( NumberFormatException e )
    {
      throw new IOException( "Invalid DMSP file: start lat/lon string <" + startLatLon + "> not parseable: " + e.getMessage() );
    }
    this.startLatitudeAtt = new Attribute( this.startLatitudeAttName, lat);
    this.startLongitudeAtt = new Attribute( this.startLongitudeAttName, lon);

    // Read the end latitude/longitude information.
    String endLatLon = (String) headerInfo.getHeaderInfoTitle.END_LAT_LON.toString());
    latLon = endLatLon.split( " ");
    if ( latLon.length != 2) throw new IOException( "Invalid DMSP file: end lat/lon <" + endLatLon + "> invalid.");
    try
    {
      lat = Double.valueOf( latLon[0]);
      lon = Double.valueOf( latLon[1]);
    }
    catch ( NumberFormatException e )
    {
      throw new IOException( "Invalid DMSP file: end lat/lon string <" + endLatLon + "> not parseable: " + e.getMessage() );
    }
    this.endLatitudeAtt = new Attribute( this.endLatitudeAttName, lat);
    this.endLongitudeAtt = new Attribute( this.endLongitudeAttName, lon);

    // Read the start sub-solar coordinates.
    this.startSubsolarCoordsAtt = new Attribute( this.startSubsolarCoordsAttName,
                                                 (String) headerInfo.get( HeaderInfoTitle.START_SUBSOLAR_COORD.toString()));

    // Read the end sub-solar coordinates.
    this.endSubsolarCoordsAtt = new Attribute( this.endSubsolarCoordsAttName,
                                               (String) headerInfo.get( HeaderInfoTitle.END_SUBSOLAR_COORD.toString()));

    // Read the start lunar coordinates.
    this.startLunarCoordsAtt = new Attribute( this.startLunarCoordsAttName,
                                              (String) headerInfo.get( HeaderInfoTitle.START_LUNAR_COORD.toString()));

    // Read the end lunar coordinates.
    this.endLunarCoordsAtt = new Attribute( this.endLunarCoordsAttName,
                                            (String) headerInfo.get( HeaderInfoTitle.END_LUNAR_COORD.toString()));

    // Read the ascending node.
    Double ascendingNode = Double.valueOf( (String) headerInfo.get( HeaderInfoTitle.ASCENDING_NODE.toString()) );
    this.ascendingNodeAtt = new Attribute( this.ascendingNodeAttName, ascendingNode);

    Double nodeHeading = Double.valueOf( (String) headerInfo.get( HeaderInfoTitle.NODE_HEADING.toString()) );
    this.nodeHeadingAtt = new Attribute( this.nodeHeadingAttName, nodeHeading);
  }
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    numSamplesPerBandDim = new Dimension(
            this.numSamplesPerBandDimName,
            numSamplesPerBand);

    // Read nominal resolution information
    nominalResolutionAtt = new Attribute( nominalResolutionAttName,
                                          (String) headerInfo.get( HeaderInfoTitle.NOMINAL_RESOLUTION.toString()));

    // Read bands per scanlin information.
    bandsPerScanlineAtt = new Attribute( bandsPerScanlineAttName,
                                         Integer.valueOf( (String) headerInfo.get( HeaderInfoTitle.BANDS_PER_SCANLINE.toString())));

    // Read bytes per smaple information
    bytesPerSampleAtt = new Attribute( bytesPerSampleAttName,
                                       Integer.valueOf( (String) headerInfo.get( HeaderInfoTitle.BYTES_PER_SAMPLE.toString())));;

    // Read byte offset for band 1 information.
    byteOffsetBand1Att = new Attribute( byteOffsetBand1AttName,
                                        Integer.valueOf( (String) headerInfo.get( HeaderInfoTitle.BYTE_OFFSET_BAND_1.toString())));

    // Read byte offset for band 2 information.
    byteOffsetBand2Att = new Attribute( byteOffsetBand2AttName,
                                        Integer.valueOf( (String) headerInfo.get( HeaderInfoTitle.BYTE_OFFSET_BAND_2.toString())));

    // Band 1 description
    band1Att = new Attribute( band1AttName, (String) headerInfo.get( HeaderInfoTitle.BAND_1.toString()));

    // Band 2 description
    band2Att = new Attribute( band2AttName, (String) headerInfo.get( HeaderInfoTitle.BAND_2.toString()));

    // Band organization
    bandOrganizationAtt = new Attribute( bandOrganizationAttName,
                                         (String) headerInfo.get( HeaderInfoTitle.ORGANIZATION.toString()));

    // thermal offset
    thermalOffsetAtt = new Attribute( thermalOffsetAttName,
                                      (String) headerInfo.get( HeaderInfoTitle.THERMAL_OFFSET.toString()));

    // thermal scale
    thermalScaleAtt = new Attribute( thermalScaleAttName,
                                      (String) headerInfo.get( HeaderInfoTitle.THERMAL_SCALE.toString()));

    // percent daylight
    percentDaylightAtt = new Attribute( percentDaylightAttName,
                                        Double.valueOf( (String) headerInfo.get( HeaderInfoTitle.PERCENT_DAYLIGHT.toString())));

    // percent full moon
    percentFullMoonAtt = new Attribute( percentFullMoonAttName,
                                        Double.valueOf( (String) headerInfo.get( HeaderInfoTitle.PERCENT_FULL_MOON.toString())));

    // percent terminator evident
    percentTerminatorEvidentAtt = new Attribute( percentTerminatorEvidentAttName,
                                        Double.valueOf( (String) headerInfo.get( HeaderInfoTitle.PERCENT_TERMINATOR_EVIDENT.toString())));
  }
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