Examples of QualityAssessmentAdapter

inspector.jqcml.jaxb.adapters.QualityAssessmentAdapter
Converts between a {@link QualityAssessmentList} and a {@link QualityAssessment}. During this conversion the {@link MetaDataParameter}s, {@link QualityParameter}s and {@link AttachmentParameter}s are stored in a separate {@link Map}, indexed by their id.

Examples of inspector.jqcml.jaxb.adapters.QualityAssessmentAdapter

   * @param index  The {@link QcMLIndexer} constructed from the qcML file
   * @param unmarshaller  The {@link QcMLUnmarshaller} used to unmarshal the qcML file
   * @return An iterator over all QualityAssessment objects in the given qcML file
   */
  public static Iterator<QualityAssessment> createQualityAssessmentIterator(QcMLIndexer index, QcMLUnmarshaller unmarshaller) {
    return new QualityAssessmentIterator(index, unmarshaller, QualityAssessmentList.class, QualityAssessment.class, new QualityAssessmentAdapter());
  }

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Examples of inspector.jqcml.jaxb.adapters.QualityAssessmentAdapter

    String xmlSnippet = index.readXML(elem);
    try {
      // unmarshal this element
      Object temp = unmarshaller.unmarshal(xmlSnippet);
      QualityAssessmentList qaList = (QualityAssessmentList) JAXBIntrospector.getValue(temp);
      QualityAssessmentAdapter adapter = new QualityAssessmentAdapter();
      QualityAssessment result = adapter.unmarshal(qaList);
      
      // resolve references to Cv's (unmarshal them if required)
      adapter.resolveReferences(result, cvCache, index, unmarshaller);
      
      // set the isSet flag based on the element name
      if(unmarshaller.getIntrospector().getElementName(temp).getLocalPart().equals("setQuality"))
        result.setSet(true);
      else

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Examples of inspector.jqcml.jaxb.adapters.QualityAssessmentAdapter

        // unmarshal to a QualityAssessmentList, and subsequently call the QualityAssessmentAdapter manually
        // manually calling the adapter is required because XmlJavaTypeAdapter can't be used on XmlRootElement
        // see: https://java.net/jira/browse/JAXB-117
        Object temp = unmarshaller.unmarshal(xmlSnippet);
        QualityAssessmentList qaList = (QualityAssessmentList) JAXBIntrospector.getValue(temp);
        QualityAssessmentAdapter adapter = new QualityAssessmentAdapter();
        QualityAssessment result = adapter.unmarshal(qaList);
        
        // resolve references to Cv's (unmarshal them if required)
        // use a cache of unmarshalled Cv's because we might encounter the same Cv multiple times
        HashMap<String, Cv> cvCache = new HashMap<>();
        adapter.resolveReferences(result, cvCache, index, unmarshaller);
        
        // set the isSet flag based on the element name
        if(unmarshaller.getIntrospector().getElementName(temp).getLocalPart().equals("setQuality"))
          result.setSet(true);
        else

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