Package picard.illumina.parser.fakers

Examples of picard.illumina.parser.fakers.MultiTileBclFileFaker


    final CycleIlluminaFileMap cycleFileMap = new CycleIlluminaFileMap();

    MultiTileBclFileUtil(final File basecallLaneDir, final int lane) {
        // Since these file names do not contain lane number, first two args to ctor are the same.
        super("^(\\d{4}).bcl.bgzf$", ".bcl.bgzf", basecallLaneDir,
                new MultiTileBclFileFaker(), lane);
        this.basecallLaneDir = basecallLaneDir;
        bci = new File(basecallLaneDir, "s_" + lane + ".bci");
        // Do this once rather than when deciding if these files exist and again later.
        final File[] cycleFiles = IOUtil.getFilesMatchingRegexp(base, matchPattern);
        if (bci.exists()) {
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