Examples of org.semanticweb.owlapi.model.OWLOntology

org.semanticweb.owlapi.model.OWLOntology
3.org/TR/owl2-syntax/#Ontologies">Ontology in the OWL 2 specification.
An {@code OWLOntology} consists of a possibly empty set of{@link org.semanticweb.owlapi.model.OWLAxiom}s and a possibly empty set of {@link OWLAnnotation}s. An ontology can have an ontology IRI which can be used to identify the ontology. If it has an ontology IRI then it may also have an ontology version IRI. Since OWL 2, an ontology need not have an ontology IRI. (See the OWL 2 Structural Specification An ontology cannot be modified directly. Changes must be applied via its {@code OWLOntologyManager}. @author Matthew Horridge, The University Of Manchester, Bio-HealthInformatics Group @since 2.0.0

    }


    @Test
    public void shouldParseFixedQuotesLiterals4()
            throws OWLOntologyCreationException {
        OWLOntology o = loadOntologyFromString(new StringDocumentSource(
                "<urn:test#s> <urn:test#p> \"\"\"\"\"\\\"\"\"\" .", iri, tf,
                null));
        for (OWLAnnotationAssertionAxiom ax : o.getAnnotationAssertionAxioms(s)) {
            assertEquals("\"\"\"", ((OWLLiteral) ax.getValue()).getLiteral());
        }
    }

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    }


    @Test
    public void shouldParseFixedQuotesLiterals5()
            throws OWLOntologyCreationException {
        OWLOntology o = loadOntologyFromString(new StringDocumentSource(
                "<urn:test#s> <urn:test#p> \"\"\"\"\"\\u0061\"\"\" .", iri, tf,
                null));
        for (OWLAnnotationAssertionAxiom ax : o.getAnnotationAssertionAxioms(s)) {
            assertEquals("\"\"a", ((OWLLiteral) ax.getValue()).getLiteral());
        }
    }

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public class NestedClassExpressionRoundTrippingTestCase extends
        AbstractRoundTrippingTestCase {


    @Override
    protected OWLOntology createOntology() {
        OWLOntology ont = getOWLOntology("OntA");
        OWLObjectProperty prop = ObjectProperty(iri("propP"));
        OWLClass clsA = Class(iri("A"));
        OWLClass clsB = Class(iri("B"));
        OWLClassExpression desc = ObjectSomeValuesFrom(prop,
                ObjectSomeValuesFrom(prop, clsB));

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        String working = "@prefix rdfs:    <http://www.w3.org/2000/01/rdf-schema#> .\n @prefix foaf:    <http://xmlns.com/foaf/0.1/> .\n foaf:fundedBy rdfs:isDefinedBy <http://xmlns.com/foaf/0.1/> .";
        OWLAxiom expected = AnnotationAssertion(df.getRDFSIsDefinedBy(),
                IRI("http://xmlns.com/foaf/0.1/fundedBy"),
                IRI("http://xmlns.com/foaf/0.1/"));
        // when
        OWLOntology o = loadOntologyFromString(working);
        // then
        assertTrue(o.getAxioms().contains(expected));
    }

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                + "rdfs:label \"\"\"" + literal + "\"\"\"@en .";
        OWLAxiom expected = AnnotationAssertion(df.getRDFSLabel(),
                IRI("http://xmlns.com/foaf/0.1/fundedBy"),
                Literal(literal, "en"));
        // when
        OWLOntology o = loadOntologyFromString(working);
        // then
        assertEquals(expected, o.getAxioms().iterator().next());
    }

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        String input = "@prefix f:    <urn:test/> . f:r f:p f: .";
        OWLAxiom expected = df.getOWLAnnotationAssertionAxiom(
                df.getOWLAnnotationProperty(IRI("urn:test/p")),
                IRI("urn:test/r"), IRI("urn:test/"));
        // when
        OWLOntology o = loadOntologyFromString(input);
        // then
        assertTrue(o.getAxioms().contains(expected));
    }

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    @Test
    public void shouldResolveAgainstBase() throws OWLOntologyCreationException {
        // given
        String input = "@base <http://test.org/path#> .\n <a1> <b1> <c1> .";
        // when
        OWLOntology o = loadOntologyFromString(input);
        // then
        String axioms = o.getAxioms().toString();
        assertTrue(axioms.contains("http://test.org/a1"));
        assertTrue(axioms.contains("http://test.org/b1"));
        assertTrue(axioms.contains("http://test.org/c1"));
    }

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    // test for 3543488
    @Test
    public void shouldRoundTripTurtleWithsharedBnodes() throws Exception {
        String input = "@prefix ex: <http://example.com/test> .\n ex:ex1 a ex:Something ; ex:prop1 _:a .\n _:a a ex:Something1 ; ex:prop2 _:b .\n _:b a ex:Something ; ex:prop3 _:a .";
        OWLOntology ontology = loadOntologyFromString(input);
        OWLOntology onto2 = roundTrip(ontology, new TurtleDocumentFormat());
        equal(ontology, onto2);
    }

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    // test for 335
    @Test
    public void shouldParseScientificNotation()
            throws OWLOntologyCreationException {
        String input = "<http://dbpedia.org/resource/South_Africa> <http://dbpedia.org/ontology/areaTotal> 1e+07 .";
        OWLOntology ontology = loadOntologyFromString(input);
        OWLAnnotationProperty p = AnnotationProperty(IRI("http://dbpedia.org/ontology/areaTotal"));
        assertTrue(ontology.getAnnotationPropertiesInSignature(EXCLUDED)
                .contains(p));
        IRI i = IRI("http://dbpedia.org/resource/South_Africa");
        assertTrue(ontology.containsAxiom(AnnotationAssertion(p, i,
                Literal("1.0E7", OWL2Datatype.XSD_DOUBLE))));
    }

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                + "<owl:AllDifferent><owl:members rdf:parseType=\"Collection\">"
                + "<rdf:Description rdf:about=\"Peter\" />"
                + "<rdf:Description rdf:about=\"Peter_Griffin\" />"
                + "<rdf:Description rdf:about=\"Petre\" />"
                + "</owl:members></owl:AllDifferent></rdf:RDF>";
        OWLOntology o1 = loadOntologyFromString(onto1);
        OWLOntology o2 = loadOntologyFromString(onto2);
        assertEquals(o2.getLogicalAxiomCount(), o1.getLogicalAxiomCount());
    }

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