Package org.securegraph

Examples of org.securegraph.Vertex

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            }

            VertexBuilder vertexBuilder = getDataImporter().getGraph().prepareVertex(getMediaId(row), getDataImporter().getVisibility());
            LumifyProperties.RAW.addPropertyValue(vertexBuilder, propertyKey, propertyValue, getDataImporter().getVisibility());
            LumifyProperties.TITLE.setProperty(vertexBuilder, title, getDataImporter().getVisibility());
            Vertex mediaVertex = vertexBuilder.save(getDataImporter().getAuthorizations());

            Vertex sourceVertex = getVertexCache().get(getObjectVertexId(row.getLinkObjectId()));
            checkNotNull(sourceVertex, "Could not find source vertex for media object: " + row.getLinkObjectId());

            String edgeId = getEdgeId(row);
            String edgeLabel = getEdgeLabel(row);
            getDataImporter().getGraph().addEdge(edgeId, sourceVertex, mediaVertex, edgeLabel, getDataImporter().getVisibility(), getDataImporter().getAuthorizations());
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                    .addPropertyValue(MULTI_VALUE_PROPERTY_KEY, geoLocationIri, geoPoint, metadata, sourceVertex.getVisibility());
            LumifyProperties.CONCEPT_TYPE.addPropertyValue(resolvedToVertexBuilder, MULTI_VALUE_PROPERTY_KEY, zipCodeIri, metadata, sourceVertex.getVisibility());
            LumifyProperties.SOURCE.addPropertyValue(resolvedToVertexBuilder, MULTI_VALUE_PROPERTY_KEY, "Zip Code Resolver", metadata, sourceVertex.getVisibility());
            LumifyProperties.TITLE.addPropertyValue(resolvedToVertexBuilder, MULTI_VALUE_PROPERTY_KEY, title, metadata, sourceVertex.getVisibility());
            LumifyProperties.VISIBILITY_JSON.addPropertyValue(resolvedToVertexBuilder, MULTI_VALUE_PROPERTY_KEY, sourceVertexVisibilityJson, metadata, sourceVertex.getVisibility());
            Vertex zipCodeVertex = resolvedToVertexBuilder.save(authorizations);
            getGraph().flush();

            String edgeId = sourceVertex.getId() + "-" + artifactHasEntityIri + "-" + zipCodeVertex.getId();
            Edge resolvedEdge = getGraph().prepareEdge(edgeId, sourceVertex, zipCodeVertex, artifactHasEntityIri, sourceVertex.getVisibility()).save(authorizations);
            LumifyProperties.VISIBILITY_JSON.addPropertyValue(resolvedEdge, MULTI_VALUE_PROPERTY_KEY, sourceVertexVisibilityJson, metadata, sourceVertex.getVisibility(), authorizations);
            VisibilityJson visibilityJson = LumifyProperties.TERM_MENTION_VISIBILITY_JSON.getPropertyValue(termMention);
            if (visibilityJson != null && visibilityJson.getWorkspaces().size() > 0) {
                Set<String> workspaceIds = visibilityJson.getWorkspaces();
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        ObjectStream<String> untokenizedLineStream = new PlainTextByLineStream(in, "UTF-8");
        String line;
        int charOffset = 0;

        LOGGER.debug("Processing artifact content stream");
        Vertex sourceVertex = (Vertex) data.getElement();
        List<Vertex> termMentions = new ArrayList<Vertex>();
        while ((line = untokenizedLineStream.read()) != null) {
            termMentions.addAll(processLine(sourceVertex, data.getProperty().getKey(), line, charOffset, LumifyProperties.VISIBILITY_JSON.getPropertyValue(sourceVertex)));
            getGraph().flush();
            charOffset += line.length() + NEW_LINE_CHARACTER_LENGTH;
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        this.vertexIdCache.put(hash, entityVertex.getId());
        this.vertexCache.put(hash, entityVertex);
    }

    public Vertex getVertex(Graph graph, String hash, Authorizations authorizations) {
        Vertex vertex = vertexCache.getIfPresent(hash);
        if (vertex != null) {
            return vertex;
        }

        String vertexId = getCachedVertexId(hash);
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    public void execute(InputStream in, GraphPropertyWorkData data) throws Exception {
        LOGGER.debug("Extracting phone numbers from provided text");

        final String text = CharStreams.toString(new InputStreamReader(in, Charsets.UTF_8));

        Vertex sourceVertex = (Vertex) data.getElement();
        VisibilityJson visibilityJson = LumifyProperties.VISIBILITY_JSON.getPropertyValue(sourceVertex);
        final Iterable<PhoneNumberMatch> phoneNumbers = phoneNumberUtil.findNumbers(text, defaultRegionCode);
        List<Vertex> termMentions = new ArrayList<Vertex>();
        for (final PhoneNumberMatch phoneNumber : phoneNumbers) {
            final String formattedNumber = phoneNumberUtil.format(phoneNumber.number(), PhoneNumberUtil.PhoneNumberFormat.E164);
            int start = phoneNumber.start();
            int end = phoneNumber.end();

            Vertex termMention = new TermMentionBuilder()
                    .sourceVertex(sourceVertex)
                    .propertyKey(data.getProperty().getKey())
                    .start(start)
                    .end(end)
                    .title(formattedNumber)
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        String workspaceId = getRequiredParameter(request, "workspaceId");

        User user = getUser(request);
        Authorizations authorizations = getAuthorizations(request, user);

        Vertex vertex = graph.getVertex(graphVertexId, authorizations);
        if (vertex == null) {
            respondWithNotFound(response, String.format("vertex %s not found", graphVertexId));
            return;
        }

        ClientApiDetectedObjects detectedObjects = new ClientApiDetectedObjects();
        Iterable<Property> detectedObjectProperties = vertex.getProperties(propertyName);
        if (detectedObjectProperties == null || IterableUtils.count(detectedObjectProperties) == 0) {
            respondWithNotFound(response, String.format("property %s not found on vertex %s", propertyName, vertex.getId()));
            return;
        }
        detectedObjects.addDetectedObjects(ClientApiConverter.toClientApiProperties(detectedObjectProperties, workspaceId));

        respondWithClientApiObject(response, detectedObjects);
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    @Test
    public void testEntityExtraction() throws Exception {
        JSONObject visibilityJson = new JSONObject();
        visibilityJson.put("source", "");
        Vertex vertex = graph.prepareVertex("v1", new Visibility(""))
                .setProperty("text", "none", new Visibility(""))
                .setProperty(LumifyProperties.VISIBILITY_JSON.getPropertyName(), visibilityJson, new Visibility(""))
                .save(new InMemoryAuthorizations());

        GraphPropertyWorkData workData = new GraphPropertyWorkData(vertex, vertex.getProperty("text"), null, null);
        extractor.setVisibilityTranslator(visibilityTranslator);
        extractor.execute(new ByteArrayInputStream(text.getBytes("UTF-8")), workData);

        List<Vertex> termMentions = toList(vertex.getVertices(Direction.OUT, LumifyProperties.TERM_MENTION_LABEL_HAS_TERM_MENTION, authorizations));

        assertEquals(3, termMentions.size());

        boolean foundBobRobertson = false;
        boolean foundBenghazi = false;
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        final String multiValueKey = getRequiredParameter(request, "multiValueKey");
        String workspaceId = getActiveWorkspaceId(request);
        User user = getUser(request);
        Authorizations authorizations = getAuthorizations(request, user);

        Vertex artifactVertex = graph.getVertex(vertexId, authorizations);
        ArtifactDetectedObject artifactDetectedObject = LumifyProperties.DETECTED_OBJECT.getPropertyValue(artifactVertex, multiValueKey);
        Edge edge = graph.getEdge(artifactDetectedObject.getEdgeId(), authorizations);
        Vertex resolvedVertex = edge.getOtherVertex(artifactVertex.getId(), authorizations);

        SandboxStatus vertexSandboxStatus = GraphUtil.getSandboxStatus(resolvedVertex, workspaceId);
        SandboxStatus edgeSandboxStatus = GraphUtil.getSandboxStatus(edge, workspaceId);
        if (vertexSandboxStatus == SandboxStatus.PUBLIC && edgeSandboxStatus == SandboxStatus.PUBLIC) {
            LOGGER.warn("Can not unresolve a public entity");
            response.sendError(HttpServletResponse.SC_BAD_REQUEST);
            chain.next(request, response);
            return;
        }

        VisibilityJson visibilityJson;
        if (vertexSandboxStatus == SandboxStatus.PUBLIC) {
            visibilityJson = LumifyProperties.VISIBILITY_JSON.getPropertyValue(edge);
            visibilityJson = GraphUtil.updateVisibilityJsonRemoveFromWorkspace(visibilityJson, workspaceId);
        } else {
            visibilityJson = LumifyProperties.VISIBILITY_JSON.getPropertyValue(resolvedVertex);
            visibilityJson = GraphUtil.updateVisibilityJsonRemoveFromWorkspace(visibilityJson, workspaceId);
        }
        LumifyVisibility lumifyVisibility = visibilityTranslator.toVisibility(visibilityJson);

        // remove edge
        graph.removeEdge(edge, authorizations);
        auditRepository.auditRelationship(AuditAction.DELETE, artifactVertex, resolvedVertex, edge, "", "", user, lumifyVisibility.getVisibility());

        // remove property
        LumifyProperties.DETECTED_OBJECT.removeProperty(artifactVertex, multiValueKey, authorizations);

        graph.flush();

        this.workQueueRepository.pushEdgeDeletion(edge);
        this.workQueueRepository.pushGraphPropertyQueue(artifactVertex, multiValueKey,
                LumifyProperties.DETECTED_OBJECT.getPropertyName(), workspaceId, visibilityJson.getSource());

        auditRepository.auditVertex(AuditAction.UNRESOLVE, resolvedVertex.getId(), "", "", user, lumifyVisibility.getVisibility());

        ClientApiElement result = ClientApiConverter.toClientApi(artifactVertex, workspaceId, authorizations);
        respondWithClientApiObject(response, result);
    }
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            ExistingElementMutation<Vertex> m = data.getElement().prepareMutation();
            Map<String, Object> metadata = data.createPropertyMetadata();
            metadata.put(LumifyProperties.META_DATA_TEXT_DESCRIPTION, "Close Caption");
            addVideoTranscriptAsTextPropertiesToMutation(m, PROPERTY_KEY, videoTranscript, metadata, data.getVisibility());
            Vertex v = m.save(getAuthorizations());
            getAuditRepository().auditVertexElementMutation(AuditAction.UPDATE, m, v, PROPERTY_KEY, getUser(), data.getVisibility());
            getAuditRepository().auditAnalyzedBy(AuditAction.ANALYZED_BY, v, getClass().getSimpleName(), getUser(), data.getVisibility());

            getGraph().flush();
            pushVideoTranscriptTextPropertiesOnWorkQueue(data.getElement(), PROPERTY_KEY, videoTranscript);
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        ObjectStream<String> untokenizedLineStream = new PlainTextByLineStream(new InputStreamReader(in));
        String line;
        int charOffset = 0;

        LOGGER.debug("Processing artifact content stream");
        Vertex sourceVertex = (Vertex) data.getElement();
        List<Vertex> termMentions = new ArrayList<Vertex>();
        while ((line = untokenizedLineStream.read()) != null) {
            termMentions.addAll(processLine(sourceVertex, data.getProperty().getKey(), line, charOffset, LumifyProperties.VISIBILITY_JSON.getPropertyValue(sourceVertex)));
            getGraph().flush();
            charOffset += line.length() + NEW_LINE_CHARACTER_LENGTH;
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