Examples of org.openbel.framework.core.df.DBConnection

org.openbel.framework.core.df.DBConnection
DBConnection encapsulates the database connection and which {@link DatabaseType} it originated from. @author Anthony Bargnesi {@code } @author Steve Ungerer {@code sungerer@selventa.com}

        final String kamURL = sysconfig.getKamURL();
        final String kamUser = sysconfig.getKamUser();
        final String kamPass = sysconfig.getKamPassword();


        // stageOutput("Building KAM at - " + kamURL);
        DBConnection dbc = null;
        try {
            dbc = p4.stage1ConnectKAMStore(kamURL, kamUser, kamPass);
        } catch (DBConnectionFailure e) {
            e.printStackTrace();
            stageError(e.getUserFacingMessage());

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    /**
     * {@inheritDoc}
     */
    @Override
    public void setupKAMCatalogSchema() throws SQLException, IOException {
        DBConnection kamDbc = null;
        try {
            kamDbc = createConnection();
            runScripts(kamDbc, "/" + kamDbc.getType() + KAM_CATALOG_SQL_PATH,
                    getSystemConfiguration().getKamCatalogSchema(),
                    getSchemaManagementStatus(kamDbc));
        } finally {
            closeConnection(kamDbc);
        }

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Related Classes of org.openbel.framework.core.df.DBConnection

org.openbel.framework.api.internal.KamInfoUtil

org.openbel.framework.common.DBConnectionFailure

org.openbel.framework.common.InvalidArgument

org.openbel.framework.compiler.kam.KAMStoreSchemaServiceImpl

org.openbel.framework.tools.kamstore.KamComparator

org.openbel.framework.tools.OrthologizeTool

org.openbel.framework.tools.PhaseFourApplication

org.openbel.framework.tools.pkam.DefaultPKAMSerializationService

java.sql.Connection

java.sql.SQLException

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