Package org.molgenis.io.processor

Examples of org.molgenis.io.processor.CellProcessor

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  }

  @Test
  public void addCellProcessor_header() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();
    CsvReader csvReader = new CsvReader(new StringReader("col1,col2\nval1,val2"), ',', true);
    try
    {
      csvReader.addCellProcessor(processor);
      for (@SuppressWarnings("unused")
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  }

  @Test
  public void addCellProcessor_data() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processData()).thenReturn(true).getMock();
    CsvReader csvReader = new CsvReader(new StringReader("col1,col2\nval1,val2"), ',', true);
    try
    {
      csvReader.addCellProcessor(processor);
      for (@SuppressWarnings("unused")
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  }

  @Test
  public void addCellProcessor() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();

    KeyValueTuple row1 = new KeyValueTuple();
    row1.set("col1", "val1");
    row1.set("col2", "val2");
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  }

  @Test
  public void addCellProcessor_header() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();

    KeyValueTuple tuple = new KeyValueTuple();
    tuple.set("col1", "val1");
    tuple.set("col2", "val2");
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  }

  @Test
  public void addCellProcessor_data() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processData()).thenReturn(true).getMock();

    Tuple dataTuple = mock(Tuple.class);
    when(dataTuple.getNrCols()).thenReturn(2);
    when(dataTuple.get(0)).thenReturn("val1");
    when(dataTuple.get(1)).thenReturn("val2");
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  }

  @Test
  public void addCellProcessor_header() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();
    Tuple headerTuple = mock(Tuple.class);
    when(headerTuple.getNrCols()).thenReturn(2);
    when(headerTuple.getColNames()).thenReturn(Arrays.asList("col1", "col2"));

    KeyValueTuple row1 = new KeyValueTuple();
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  }

  @Test
  public void addCellProcessor_data() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processData()).thenReturn(true).getMock();

    Tuple dataTuple = mock(Tuple.class);
    when(dataTuple.hasColNames()).thenReturn(true);
    when(dataTuple.getNrCols()).thenReturn(2);
    when(dataTuple.get("col1")).thenReturn("val1");
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  }

  @Test
  public void addCellProcessor_header()
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();
    excelSheetReader.addCellProcessor(processor);
    for (@SuppressWarnings("unused")
    Tuple tuple : excelSheetReader)
    {
    }
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  }

  @Test
  public void addCellProcessor_data()
  {
    CellProcessor processor = when(mock(CellProcessor.class).processData()).thenReturn(true).getMock();
    excelSheetReader.addCellProcessor(processor);
    for (Tuple tuple : excelSheetReader)
      tuple.get("col2");
    verify(processor).process("val2");
    verify(processor).process("val4");
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  }

  @Test
  public void addCellProcessor_header() throws IOException
  {
    CellProcessor processor = when(mock(CellProcessor.class).processHeader()).thenReturn(true).getMock();
    excelReader.addCellProcessor(processor);
    for (TupleReader sheetReader : excelReader)
    {
      for (@SuppressWarnings("unused")
      Tuple tuple : sheetReader)
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Related Classes of org.molgenis.io.processor.CellProcessor

  • org.molgenis.io.csv.CsvReaderTest
  • org.molgenis.io.csv.CsvWriterTest
  • org.molgenis.io.excel.ExcelReaderTest
  • org.molgenis.io.excel.ExcelSheetReaderTest
  • org.molgenis.io.excel.ExcelSheetWriterTest
  • org.molgenis.io.excel.ExcelWriterTest
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