Package org.dcm4che3.conf.api

Examples of org.dcm4che3.conf.api.AttributeCoercion

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                        : ByteOrder.LITTLE_ENDIAN);
                this.frameLength = pmi.frameLength(width, height, samples, bitsAllocated);
                this.pixeldata = (BulkData) pixeldata;
            } else {
                String tsuid = dis.getTransferSyntax();
                ImageReaderParam param =
                        ImageReaderFactory.getImageReaderParam(tsuid);
                if (param == null)
                    throw new IOException("Unsupported Transfer Syntax: " + tsuid);
                this.decompressor = ImageReaderFactory.getImageReader(param);
                this.patchJpegLS = param.patchJPEGLS;
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    private ImageInputStreamImpl iisOfFrame(int frameIndex)
            throws IOException {
        SegmentedInputImageStream siis = new SegmentedInputImageStream(
                iis, pixeldataFragments, frameIndex);
        return patchJpegLS != null
                ? new PatchJPEGLSImageInputStream(siis, patchJpegLS)
                : siis;
    }
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        imageReader.setInput(iis);
        return imageReader.read(frame-1, readParam());
    }

    private ImageReadParam readParam() {
        DicomImageReadParam param =
                (DicomImageReadParam) imageReader.getDefaultReadParam();
        param.setWindowCenter(windowCenter);
        param.setWindowWidth(windowWidth);
        param.setAutoWindowing(autoWindowing);
        param.setWindowIndex(windowIndex);
        param.setVOILUTIndex(voiLUTIndex);
        param.setPreferWindow(preferWindow);
        param.setPresentationState(prState);
        param.setOverlayActivationMask(overlayActivationMask);
        param.setOverlayGrayscaleValue(overlayGrayscaleValue);
        return param;
    }
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            main.setEncodingOptions(CLIUtils.encodingOptionsOf(cl));
            try {
                if (cl.hasOption("i")) {
                    String fname = cl.getOptionValue("i");
                    if (fname.equals("-")) {
                        main.parse(new DicomInputStream(System.in));
                    } else {
                        DicomInputStream dis =
                                new DicomInputStream(new File(fname));
                        try {
                            main.parse(dis);
                        } finally {
                            dis.close();
                        }
                    }
                }

                if (cl.hasOption("j"))
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        if (!from.renameTo(dest))
            throw new IOException("Failed to rename " + from + " to " + dest);
    }

    private static Attributes parse(File file) throws IOException {
        DicomInputStream in = new DicomInputStream(file);
        try {
            in.setIncludeBulkData(IncludeBulkData.NO);
            return in.readDataset(-1, Tag.PixelData);
        } finally {
            SafeClose.close(in);
        }
    }
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    }

    private static Attributes loadDicomObject(File f) throws IOException {
        if (f == null)
            return null;
        DicomInputStream dis = new DicomInputStream(f);
        try {
            return dis.readDataset(-1, -1);
        } finally {
            SafeClose.close(dis);
        }
    }
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    }

    public void validate(File file) {
        if (iod == null)
            throw new IllegalStateException("IOD net initialized");
        DicomInputStream dis = null;
        try {
            System.out.print("Validate: " + file + " ... ");
            dis = new DicomInputStream(file);
            Attributes attrs = dis.readDataset(-1, -1);
            ValidationResult result = attrs.validate(iod);
            if (result.isValid())
                System.out.println("OK");
            else {
                System.out.println("FAILED:");
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                ? withfmi
                : tsuid != null && !tsuid.equals(
                        fmi.getString(Tag.TransferSyntaxUID, null))) {
            fmi = dataset.createFileMetaInformation(tsuid);
        }
        @SuppressWarnings("resource")
        DicomOutputStream dos = new DicomOutputStream(
                new BufferedOutputStream(out),
                fmi != null
                        ? UID.ExplicitVRLittleEndian
                        : tsuid != null
                                ? tsuid
                                : UID.ImplicitVRLittleEndian);
        dos.setEncodingOptions(encOpts);
        dos.writeDataset(fmi, dataset);
        dos.finish();
        dos.flush();
    }
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        contentSeq.add(contentItem(valueTypeOf(inst), refSOP(cuid, iuid)));
        return true;
    }

    public void writeKOS() throws IOException {
        DicomOutputStream dos = new DicomOutputStream(
                new BufferedOutputStream(fname != null
                        ? new FileOutputStream(fname)
                        : new FileOutputStream(FileDescriptor.out)),
                nofmi ? UID.ImplicitVRLittleEndian
                      : UID.ExplicitVRLittleEndian);
        dos.setEncodingOptions(encOpts);
        try {
            dos.writeDataset(
                    nofmi ? null : kos.createFileMetaInformation(tsuid),
                    kos);
        } finally {
            dos.close();
        }
    }
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    private void storeTo(Association as, Attributes fmi,
            PDVInputStream data, File file) throws IOException  {
        LOG.info("{}: M-WRITE {}", as, file);
        file.getParentFile().mkdirs();
        DicomOutputStream out = new DicomOutputStream(file);
        try {
            out.writeFileMetaInformation(fmi);
            data.copyTo(out);
        } finally {
            SafeClose.close(out);
        }
    }
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Related Classes of org.dcm4che3.conf.api.AttributeCoercion

  • org.apache.camel.Exchange
  • org.apache.commons.cli.CommandLine
  • org.apache.commons.cli.OptionGroup
  • org.apache.commons.cli.Options
  • org.dcm4che3.audit.AuditMessage
  • org.dcm4che3.audit.AuditMessages
  • org.dcm4che3.audit.AuditMessageTest
  • org.dcm4che3.camel.DicomConsumer$EndpointDimseRQHandlerAsyncCallback
  • org.dcm4che3.camel.test.EchoSCP
  • org.dcm4che3.conf.api.AttributeCoercion
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