Package org.broad.igv.batch

Examples of org.broad.igv.batch.BatchRunner

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                    mainFrame.setVisible(true);
                    if (igvArgs.getLocusString() != null) {
                        goToLocus(igvArgs.getLocusString());
                    }
                    if (runningBatch) {
                        LongRunningTask.submit(new BatchRunner(igvArgs.getBatchFile()));
                    }

                }
            });
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    public void actionPerformed(ActionEvent e) {

        if (e.getActionCommand().equalsIgnoreCase("run batch script...")) {
            File script = chooseScriptFile();
            if (script != null && script.isFile()) {
                final BatchRunner bRun = new BatchRunner(script.getPath());

                SwingWorker worker = new SwingWorker() {

                    @Override
                    protected Object doInBackground() throws Exception {
                        bRun.run();
                        return null;
                    }
                };

                worker.execute();
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Related Classes of org.broad.igv.batch.BatchRunner

  • org.broad.igv.ui.action.RunScriptMenuAction
  • org.broad.igv.ui.IGV$StartupRunnable
  • org.broad.igv.exceptions.DataLoadException
  • java.io.BufferedReader
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