Package org.bioinfo.ngs.qc.qualimap.process

Examples of org.bioinfo.ngs.qc.qualimap.process.ProcessBunchOfReadsTask$Result

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    } catch (Exception e) {
      e.printStackTrace();
    }
     
    DispositionReport dr = new DispositionReport();
    Result res = new Result();
    dr.getResult().add(res);
    return dr;
  }
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    return ResourceConfig.getGlobalMessage(errCode);
  }   

  public static final DispositionReport buildDispositionReport(int errNo) {
    DispositionReport dr = new DispositionReport();
    Result res = new Result();
    res.setErrno(errNo);
   
    ErrInfo ei = new ErrInfo();
    ei.setErrCode(lookupErrCode(errNo));
    ei.setValue(lookupErrText(errNo));
   
    res.setErrInfo(ei);
   
    dr.getResult().add(res);
       
    return dr;
  }
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      log.error(e.getMessage(),e);
      throw new DispositionReportFaultMessage(e.getMessage(), null);
    }
   
    DispositionReport dr = new DispositionReport();
    Result res = new Result();
    dr.getResult().add(res);
   
    return dr;
  }
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    } 
   
    new ValidateSubscriptionListener().validateNotification(body);
     
    DispositionReport dr = new DispositionReport();
    Result res = new Result();
    dr.getResult().add(res);
    return dr;
  }
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    } catch (Exception e) {
      e.printStackTrace();
    }
     
    DispositionReport dr = new DispositionReport();
    Result res = new Result();
    dr.getResult().add(res);
    return dr;
  }
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                List<Result> r = new ArrayList<Result>();
                if (result == null) {
                        return r;
                }
                for (int i = 0; i < result.size(); i++) {
                        Result x = new Result();
                        x.setErrno(result.get(i).getErrno());
                        if (result.get(i).getKeyType() != null) {
                                switch (result.get(i).getKeyType()) {
                                        case BINDING_KEY:
                                                x.setKeyType(KeyType.BINDING_KEY);
                                                break;
                                        case BUSINESS_KEY:
                                                x.setKeyType(KeyType.BUSINESS_KEY);
                                                break;
                                        case SERVICE_KEY:
                                                x.setKeyType(KeyType.SERVICE_KEY);
                                                break;
                                        case T_MODEL_KEY:
                                                x.setKeyType(KeyType.T_MODEL_KEY);
                                                break;
                                }
                        }
                        if (result.get(i).getErrInfo() != null) {
                                x.setErrInfo(new ErrInfo());
                                x.getErrInfo().setErrCode(result.get(i).getErrInfo().getErrCode());
                                x.getErrInfo().setValue(result.get(i).getErrInfo().getValue());
                        }
                        r.add(x);
                }
                return r;
        }
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                        while (result.getDetail().getDetailEntries().hasNext()) {
                                Object next = result.getDetail().getDetailEntries().next();
                                if (next instanceof DispositionReport) {

                                        DispositionReport z = (DispositionReport) next;
                                        Result x = new Result();
                                        r.addAll(MapResult(z.getFaultInfo().getResult()));

                                }
                                logger.warn("unable to parse fault detail, type:" + next.getClass().getCanonicalName() + " " + next.toString());
                        }
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                        } catch (Exception ex) {
                                log.warn("Your implementation on ISubscriptionCallback is faulty and threw an error, contact the developer", ex);
                        }
                }
                DispositionReport r = new DispositionReport();
                r.getResult().add(new Result());
                return r;
        }
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                @WebParam(name = "validate_values", targetNamespace = "urn:uddi-org:vs_v3", partName = "body") ValidateValues body)
                throws DispositionReportFaultMessage, RemoteException {
                messagesReceived++;
                if (VALID) {
                        DispositionReport dispositionReport = new DispositionReport();
                        dispositionReport.getResult().add(new Result());
                        return dispositionReport;
                }
                DispositionReport dispositionReport = new DispositionReport();
                Result r = new Result();
                r.setKeyType(KeyType.T_MODEL_KEY);
                r.setErrno(20200);
                r.setErrInfo(new ErrInfo());
                r.getErrInfo().setErrCode("E_invalidValue");
                r.getErrInfo().setValue("E_invalidValue");
               
                dispositionReport.getResult().add(r);
                throw new DispositionReportFaultMessage("error", dispositionReport);
        }
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                }
                if (!success) {
                        throw new DispositionReportFaultMessage(err, null);
                }
                DispositionReport dr = new DispositionReport();
                Result res = new Result();
                dr.getResult().add(res);

                return dr;
        }
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