Package org.apache.uima.collection.metadata

Examples of org.apache.uima.collection.metadata.CpeCollectionReader

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      // add collection reader that will read input docs
      cpeDesc.addCollectionReader(FileSystemCollectionReader.getDescriptorURL().toString());
      // specify configuration parameters for collection reader
      CasProcessorConfigurationParameterSettings crSettings = CpeDescriptorFactory
              .produceCasProcessorConfigurationParameterSettings();
      CpeCollectionReader cpeCollRdr = cpeDesc.getAllCollectionCollectionReaders()[0];
      cpeCollRdr.setConfigurationParameterSettings(crSettings);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_INPUTDIR, inputDir
              .getAbsolutePath());
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_ENCODING, encoding);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_LANGUAGE, language);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_XCAS, Boolean
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    // update GUI
    // Collection Reader
    CpeCollectionReader[] collRdrs = currentCpeDesc.getAllCollectionCollectionReaders(); // more
                                                                                          // than
                                                                                          // one??
    CpeCollectionReader collRdr = null;
    if (collRdrs != null && collRdrs.length > 0) {
      collRdr = collRdrs[0];
      collectionReaderPanel.clearAll();
      populateCollectionReaderPanel(collRdr.getCollectionIterator());
    } else {
      collectionReaderPanel.reset();
    }
    // CAS Initializer
    CpeCollectionReaderCasInitializer casIni = null;
    if (collRdr != null) {
      casIni = collRdr.getCasInitializer();
    }
    if (casIni != null) {
      populateCasInitializerPanel(casIni);
    } else {
      casInitializerPanel.reset();
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   */
  public BaseCollectionReader getCollectionReader() throws ResourceConfigurationException {
    checkForErrors();
    BaseCollectionReader colreader = null;
    try {
      CpeCollectionReader reader = (getCpeDescriptor().getAllCollectionCollectionReaders())[0];
      if (reader == null) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<collectionReader>", "<cpeDescriptor>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_required_element__WARNING", new Object[] {
                                    Thread.currentThread().getName(), "<collectionReader>" })));
      }

      CpeCollectionReaderIterator cit = reader.getCollectionIterator();
      if (cit == null || cit.getDescriptor() == null || cit.getDescriptor().getInclude() == null) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<include>", "<collectionIterator>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_required_element__WARNING", new Object[] {
                                    Thread.currentThread().getName(), "<include>" })));
      }
      if (cit.getDescriptor().getInclude().get() == null) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<href>", "<collectionIterator>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_attribute_from_xml_element__WARNING",
                                new Object[] { Thread.currentThread().getName(), "<href>",
                                    "<collectionIterator>" })));
      }

      String descriptorPath = CPMUtils.convertToAbsolutePath(System.getProperty("CPM_HOME"),
              CPM_HOME, cit.getDescriptor().getInclude().get());
      // create new collection reader from the descriptor
      XMLInputSource in1 = new XMLInputSource(descriptorPath);
      ResourceSpecifier colReaderSp = UIMAFramework.getXMLParser()
              .parseCollectionReaderDescription(in1);

      overrideParameterSettings(colReaderSp, cit.getConfigurationParameterSettings(),
              descriptorPath, "Collection Reader");

      // compute sofa mapping for the CAS Initializer
      CpeSofaMappings sofanamemappings = cit.getSofaNameMappings();
      HashMap sofamap = new HashMap();
      if (sofanamemappings != null) {
        CpeSofaMapping[] sofaNameMappingArray = sofanamemappings.getSofaNameMappings();
        for (int i = 0; sofaNameMappingArray != null && i < sofaNameMappingArray.length; i++) {
          CpeSofaMapping aSofaMap = sofaNameMappingArray[i];
          // if no component sofa name, then set it to default
          if (aSofaMap.getComponentSofaName() == null)
            aSofaMap.setComponentSofaName(CAS.NAME_DEFAULT_TEXT_SOFA);
          sofamap.put(aSofaMap.getComponentSofaName(), aSofaMap.getCpeSofaName());
        }
      }

      // create child UimaContext for the CollectionReader
      UimaContextAdmin collectionReaderContext = uimaContext.createChild("_CollectionReader",
              sofamap);
      Map additionalParams = new HashMap();
      additionalParams.put(Resource.PARAM_UIMA_CONTEXT, collectionReaderContext);
      colreader = (BaseCollectionReader) UIMAFramework.produceResource(BaseCollectionReader.class,
              colReaderSp, getResourceManager(), additionalParams);

      CpeCollectionReaderCasInitializer casInit = reader.getCasInitializer();
      if (casInit != null) {
        if (casInit.getDescriptor() == null) {
          throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                  new Object[] { "<descriptor>", "<casInitializer>" }, new Exception(
                          CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
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      // add collection reader that will read input docs
      cpeDesc.addCollectionReader(FileSystemCollectionReader.getDescriptorURL().toString());
      // specify configuration parameters for collection reader
      CasProcessorConfigurationParameterSettings crSettings = CpeDescriptorFactory
              .produceCasProcessorConfigurationParameterSettings();
      CpeCollectionReader cpeCollRdr = cpeDesc.getAllCollectionCollectionReaders()[0];
      cpeCollRdr.setConfigurationParameterSettings(crSettings);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_INPUTDIR, inputDir
              .getAbsolutePath());
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_ENCODING, encoding);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_LANGUAGE, language);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_XCAS, Boolean
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    return colR[0];
  }

  public static CpeCollectionReader produceCollectionReader(String aCollectionReaderDescriptorPath)
          throws CpeDescriptorException {
    CpeCollectionReader colR = produceCollectionReader();
    colR.getCollectionIterator().getDescriptor().getInclude().set(aCollectionReaderDescriptorPath);
    return colR;
  }
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    colR.getCollectionIterator().getDescriptor().getInclude().set(aCollectionReaderDescriptorPath);
    return colR;
  }

  public static CpeCollectionReader produceCollectionReader() throws CpeDescriptorException {
    CpeCollectionReader colR = new CpeCollectionReaderImpl();
    colR.setCollectionIterator(produceCollectionReaderIterator(""));
    return colR;
  }
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      // add collection reader that will read input docs
      cpeDesc.addCollectionReader(FileSystemCollectionReader.getDescriptorURL().toString());
      // specify configuration parameters for collection reader
      CasProcessorConfigurationParameterSettings crSettings = CpeDescriptorFactory
              .produceCasProcessorConfigurationParameterSettings();
      CpeCollectionReader cpeCollRdr = cpeDesc.getAllCollectionCollectionReaders()[0];
      cpeCollRdr.setConfigurationParameterSettings(crSettings);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_INPUTDIR, inputDir
              .getAbsolutePath());
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_ENCODING, encoding);
      crSettings.setParameterValue(FileSystemCollectionReader.PARAM_LANGUAGE, language);
      if (xcasInput) {
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   */
  public BaseCollectionReader getCollectionReader() throws ResourceConfigurationException {
    checkForErrors();
    BaseCollectionReader colreader = null;
    try {
      CpeCollectionReader reader = (getCpeDescriptor().getAllCollectionCollectionReaders())[0];
      if (reader == null) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<collectionReader>", "<cpeDescriptor>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_required_element__WARNING", new Object[] {
                                    Thread.currentThread().getName(), "<collectionReader>" })));
      }

      CpeCollectionReaderIterator cit = reader.getCollectionIterator();
      if (cit == null || cit.getDescriptor() == null ||
              (cit.getDescriptor().getInclude() == null && cit.getDescriptor().getImport() == null)) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<include>", "<collectionIterator>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_required_element__WARNING", new Object[] {
                                    Thread.currentThread().getName(), "<include> or <import>" })));
      }
      if (cit.getDescriptor().getInclude() != null && cit.getDescriptor().getInclude().get() == null) {
        throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                new Object[] { "<href>", "<collectionIterator>" }, new Exception(
                        CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
                                "UIMA_CPM_EXP_missing_attribute_from_xml_element__WARNING",
                                new Object[] { Thread.currentThread().getName(), "<href>",
                                    "<collectionIterator>" })));
      }

      URL descriptorUrl = cit.getDescriptor().findAbsoluteUrl(getResourceManager());
      // create new collection reader from the descriptor
      XMLInputSource in1 = new XMLInputSource(descriptorUrl);
      ResourceSpecifier colReaderSp = UIMAFramework.getXMLParser()
              .parseCollectionReaderDescription(in1);

      overrideParameterSettings(colReaderSp, cit.getConfigurationParameterSettings(), "Collection Reader");

      // compute sofa mapping for the CollectionReader
      CpeSofaMappings sofanamemappings = cit.getSofaNameMappings();
      HashMap sofamap = new HashMap();
      if (sofanamemappings != null) {
        CpeSofaMapping[] sofaNameMappingArray = sofanamemappings.getSofaNameMappings();
        for (int i = 0; sofaNameMappingArray != null && i < sofaNameMappingArray.length; i++) {
          CpeSofaMapping aSofaMap = sofaNameMappingArray[i];
          // if no component sofa name, then set it to default
          if (aSofaMap.getComponentSofaName() == null)
            aSofaMap.setComponentSofaName(CAS.NAME_DEFAULT_TEXT_SOFA);
          sofamap.put(aSofaMap.getComponentSofaName(), aSofaMap.getCpeSofaName());
        }
      }

      // create child UimaContext for the CollectionReader
      UimaContextAdmin collectionReaderContext = uimaContext.createChild("_CollectionReader",
              sofamap);
      Map additionalParams = new HashMap();
      additionalParams.put(Resource.PARAM_UIMA_CONTEXT, collectionReaderContext);
      colreader = (BaseCollectionReader) UIMAFramework.produceResource(BaseCollectionReader.class,
              colReaderSp, getResourceManager(), additionalParams);

      //set up CAS Initializer
      CpeCollectionReaderCasInitializer casInit = reader.getCasInitializer();
      if (casInit != null) {
        if (casInit.getDescriptor() == null) {
          throw new ResourceConfigurationException(InvalidXMLException.ELEMENT_NOT_FOUND,
                  new Object[] { "<descriptor>", "<casInitializer>" }, new Exception(
                          CpmLocalizedMessage.getLocalizedMessage(CPMUtils.CPM_LOG_RESOURCE_BUNDLE,
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    // update GUI
    // Collection Reader
    CpeCollectionReader[] collRdrs = currentCpeDesc.getAllCollectionCollectionReaders(); // more
                                                                                          // than
                                                                                          // one??
    CpeCollectionReader collRdr = null;
    if (collRdrs != null && collRdrs.length > 0) {
      collRdr = collRdrs[0];
      collectionReaderPanel.clearAll();
      populateCollectionReaderPanel(collRdr.getCollectionIterator());
    } else {
      collectionReaderPanel.reset();
    }
    // CAS Initializer
    CpeCollectionReaderCasInitializer casIni = null;
    if (collRdr != null) {
      casIni = collRdr.getCasInitializer();
    }
    if (casIni != null) {
      casInitializerPanel.clearAll();
      populateCasInitializerPanel(casIni);
    } else {
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          CpeDescriptorException {
    // Remove all collection readers
    cpeDesc.setAllCollectionCollectionReaders(new CpeCollectionReader[0]);

    URL descUrl = materializeDescriptor(aDesc).toURI().toURL();
    CpeCollectionReader reader = produceCollectionReader(descUrl.toString());
    cpeDesc.addCollectionReader(reader);
  }
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Related Classes of org.apache.uima.collection.metadata.CpeCollectionReader

  • org.apache.uima.application.metadata.impl.UimaApplication_Impl
  • org.apache.uima.collection.impl.cpm.container.CPEFactory
  • org.apache.uima.collection.impl.metadata.cpe.CpeDescriptorFactory
  • org.apache.uima.cpe.model.CpeDescriptorModel
  • org.apache.uima.examples.RunAE
  • org.apache.uima.fit.cpe.CpeBuilder
  • org.apache.uima.tools.cpm.CpmPanel
  • org.apache.uima.tools.RunAE
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