Package org.apache.uima.analysis_engine

Examples of org.apache.uima.analysis_engine.AnalysisEngineProcessException

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    }
    try {
      writeXmi(cas, file);
    } catch (Exception e) {
      throw new AnalysisEngineProcessException(e);
    }
  }
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    }
    try {
      FileUtils.saveString2File(newDocument.toString(), file, encoding);
    } catch (IOException e) {
      throw new AnalysisEngineProcessException(e);
    }
  }
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    stream.setGreedyRuleElement(greedyRuleElement);
    stream.setGreedyRule(greedyRule);
    try {
      script.apply(stream, crowd);
    } catch (Throwable e) {
      throw new AnalysisEngineProcessException(AnalysisEngineProcessException.ANNOTATOR_EXCEPTION,
              new Object[] {}, e);
    }
    crowd.finished(stream);

    if (removeBasics) {
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      for (String seederClass : seeders) {
        Class<?> loadClass = null;
        try {
          loadClass = Class.forName(seederClass);
        } catch (ClassNotFoundException e) {
          throw new AnalysisEngineProcessException(e);
        }
        Object newInstance = null;
        try {
          newInstance = loadClass.newInstance();
        } catch (Exception e) {
          throw new AnalysisEngineProcessException(e);
        }
        try {
          RutaAnnotationSeeder seeder = (RutaAnnotationSeeder) newInstance;
          result.add(seeder.seed(cas.getDocumentText(), cas));
        } catch (Exception e) {
          throw new AnalysisEngineProcessException(e);
        }
      }
    }
    return result;
  }
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    if (scriptLocation == null) {
      try {
        String mainScriptPath = mainScript.replaceAll("\\.", "/") + SCRIPT_FILE_EXTENSION;
        script = loadScriptIS(mainScriptPath);
      } catch (IOException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + mainScript
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] or classpath with extension .ruta"));
      } catch (RecognitionException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + mainScript
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] or classpath  with extension .ruta"));
      }
    } else {
      try {
        script = loadScript(scriptLocation);
      } catch (Exception e) {
        throw new AnalysisEngineProcessException(e);
      }
    }

    Map<String, RutaModule> additionalScriptsMap = new HashMap<String, RutaModule>();
    Map<String, AnalysisEngine> additionalEnginesMap = new HashMap<String, AnalysisEngine>();

    if (additionalUimafitEngines != null) {
      for (String eachUimafitEngine : additionalUimafitEngines) {
        AnalysisEngine eachEngine = null;
        try {
          @SuppressWarnings("unchecked")
          // Class clazz = this.getClass().getClassLoader().loadClass(eachUimafitEngine) ;
          Class<? extends AnalysisComponent> uimafitClass = (Class<? extends AnalysisComponent>) Class
                  .forName(eachUimafitEngine);
          eachEngine = AnalysisEngineFactory.createEngine(uimafitClass);
        } catch (ClassNotFoundException e) {
          throw new AnalysisEngineProcessException(e);
        } catch (ResourceInitializationException e) {
          throw new AnalysisEngineProcessException(e);
        }
        try {
          additionalEnginesMap.put(eachUimafitEngine, eachEngine);
          String[] eachEngineLocationPartArray = eachUimafitEngine.split("\\.");
          if (eachEngineLocationPartArray.length > 1) {
            String shortEachEngineLocation = eachEngineLocationPartArray[eachEngineLocationPartArray.length - 1];
            additionalEnginesMap.put(shortEachEngineLocation, eachEngine);
          }
        } catch (Exception e) {
          throw new AnalysisEngineProcessException(e);
        }
      }
    }
    if (additionalEngines != null) {
      for (String eachEngineLocation : additionalEngines) {
        AnalysisEngine eachEngine;
        String location = locate(eachEngineLocation, descriptorPaths, ".xml");
        if (location == null) {
          String locationIS = locateIS(eachEngineLocation, descriptorPaths, ".xml");
          try {
            eachEngine = engineLoader.loadEngineIS(locationIS, viewName);
          } catch (InvalidXMLException e) {
            throw new AnalysisEngineProcessException(new FileNotFoundException("Engine at ["
                    + eachEngineLocation + "] cannot be found in ["
                    + collectionToString(descriptorPaths)
                    + "] with extension .xml (from mainScript=" + mainScript + " in "
                    + collectionToString(scriptPaths)));
          } catch (ResourceInitializationException e) {
            throw new AnalysisEngineProcessException(new FileNotFoundException("Engine at ["
                    + eachEngineLocation + "] cannot be found in ["
                    + collectionToString(descriptorPaths)
                    + "] with extension .xml (from mainScript=" + mainScript + " in "
                    + collectionToString(scriptPaths)));
          } catch (IOException e) {
            throw new AnalysisEngineProcessException(new FileNotFoundException("Engine at ["
                    + eachEngineLocation + "] cannot be found in ["
                    + collectionToString(descriptorPaths)
                    + "] with extension .xml (from mainScript=" + mainScript + " in "
                    + collectionToString(scriptPaths)));
          } catch (ResourceConfigurationException e) {
            throw new AnalysisEngineProcessException(e);
          } catch (URISyntaxException e) {
            throw new AnalysisEngineProcessException(e);
          }
        } else {
          try {
            eachEngine = engineLoader.loadEngine(location, viewName);
          } catch (Exception e) {
            throw new AnalysisEngineProcessException(e);
          }
        }
        try {
          additionalEnginesMap.put(eachEngineLocation, eachEngine);
          String[] eachEngineLocationPartArray = eachEngineLocation.split("\\.");
          if (eachEngineLocationPartArray.length > 1) {
            String shortEachEngineLocation = eachEngineLocationPartArray[eachEngineLocationPartArray.length - 1];
            additionalEnginesMap.put(shortEachEngineLocation, eachEngine);
          }
        } catch (Exception e) {
          throw new AnalysisEngineProcessException(e);
        }
      }
    }

    if (additionalScripts != null) {
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    if (location == null) {
      try {
        String scriptPath = toLoad.replaceAll("\\.", "/") + SCRIPT_FILE_EXTENSION;
        eachScript = loadScriptIS(scriptPath);
      } catch (IOException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + toLoad
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] with extension .ruta"));
      } catch (RecognitionException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + toLoad
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] with extension .ruta"));
      }
    } else {
      try {
        eachScript = loadScript(location);
      } catch (IOException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + toLoad
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] with extension .ruta"));
      } catch (RecognitionException e) {
        throw new AnalysisEngineProcessException(new FileNotFoundException("Script [" + toLoad
                + "] cannot be found at [" + collectionToString(scriptPaths)
                + "] with extension .ruta"));
      }
    }
    additionalScripts.put(toLoad, eachScript);

    for (String add : eachScript.getScripts().keySet()) {
      if (!additionalScripts.containsKey(add)) {
        recursiveLoadScript(add, additionalScripts, additionalEngines, viewName);
      }
    }

    Set<String> engineKeySet = eachScript.getEngines().keySet();
    for (String eachEngineLocation : engineKeySet) {
      if (!additionalEngines.containsKey(eachEngineLocation)) {
        String engineLocation = locate(eachEngineLocation, descriptorPaths, ".xml");
        if (engineLocation == null) {
          String engineLocationIS = locateIS(eachEngineLocation, descriptorPaths, ".xml");
          try {
            AnalysisEngine eachEngine = engineLoader.loadEngineIS(engineLocationIS, viewName);
            additionalEngines.put(eachEngineLocation, eachEngine);
          } catch (Exception e) {
            // uimaFit engine?
            try {
              @SuppressWarnings("unchecked")
              Class<? extends AnalysisComponent> uimafitClass = (Class<? extends AnalysisComponent>) Class
                      .forName(eachEngineLocation);
              AnalysisEngine eachEngine = AnalysisEngineFactory.createEngine(uimafitClass);
              additionalEngines.put(eachEngineLocation, eachEngine);
            } catch (Exception e1) {
              throw new AnalysisEngineProcessException(e1);
            }
          }
        } else {
          try {
            AnalysisEngine eachEngine = engineLoader.loadEngine(engineLocation, viewName);
            additionalEngines.put(eachEngineLocation, eachEngine);
          } catch (Exception e) {
            throw new AnalysisEngineProcessException(e);
          }
        }
      }
    }
  }
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        jcas = jcaz.getView(inputViewName);
      } else {
        jcas = jcaz;
      }
    } catch (CASException e1) {
      throw new AnalysisEngineProcessException(e1.getCause());
    }
    // init:
    String documentText = jcas.getDocumentText();
    map = new int[documentText.length() + 1];
    JCas modview = null;
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      String locate = RutaEngine.locate(styleMapLocation, descriptorPaths, ".xml", false);
      if (locate != null) {
        styleMapFactory.createStyleMap(locate, jcas);
      }
    } catch (IOException e) {
      throw new AnalysisEngineProcessException(e);
    }
  }
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          lastWasEmpty = true;
        }
        offsetTillNow = offsetTillNow + eachLine.length() + nlLength;
      }
    } catch (IOException e) {
      throw new AnalysisEngineProcessException(e);
    }

  }
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   */
  public void typeSystemInit(TypeSystem aTypeSystem) throws AnalysisEngineProcessException {
    // Get a reference to the "PersonTitle" Type
    mPersonTitleType = aTypeSystem.getType("example.PersonTitle");
    if (mPersonTitleType == null) {
      throw new AnalysisEngineProcessException(AnnotatorInitializationException.TYPE_NOT_FOUND,
              new Object[] { getClass().getName(), "example.PersonTitle" });
    }

    // Get a reference to the "Kind" Feature
    mPersonTitleKindFeature = mPersonTitleType.getFeatureByBaseName("Kind");
    if (mPersonTitleKindFeature == null) {
      throw new AnalysisEngineProcessException(AnnotatorInitializationException.FEATURE_NOT_FOUND,
              new Object[] { getClass().getName(), "example.PersonTitle:Kind" });
    }

    // Get the value for the "ContainingType" parameter if there is one
    String containingTypeName = (String) getContext().getConfigParameterValue(
            "ContainingAnnotationType");
    if (containingTypeName != null) {
      mContainingType = aTypeSystem.getType(containingTypeName);
      if (mContainingType == null) {
        throw new AnalysisEngineProcessException(AnnotatorInitializationException.TYPE_NOT_FOUND,
                new Object[] { getClass().getName(), containingTypeName });
      }
    }
  }
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