Package org.apache.ctakes.dictionary.lookup.vo

Examples of org.apache.ctakes.dictionary.lookup.vo.LookupHit

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               final Set<MetaDataHit> mdhSet = namedMetaDataHits.get( fullPhrase );
               if ( mdhSet == null ) {
                  continue;
               }
               for ( MetaDataHit mdh : mdhSet ) {
                  final LookupHit lh = new LookupHit( mdh, startOffset, endOffset );
                  lookupHits.add( lh );
               }
            }
         }
      }
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      Iterator<?> lhAtOffsetItr = hitsAtOffsetCol.iterator();
      int neBegin = -1;
      int neEnd = -1;
      while (lhAtOffsetItr.hasNext())
      {
        LookupHit lh = (LookupHit) lhAtOffsetItr.next();

        neBegin = lh.getStartOffset();
        neEnd = lh.getEndOffset();
        MetaDataHit metaData = lh.getDictMetaDataHit();
       
        addTerm(jcas, metaData, neBegin, neEnd);
      }
    }
  }
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      Iterator lhAtOffsetItr = hitsAtOffsetCol.iterator();
      int neBegin = -1;
      int neEnd = -1;
      while (lhAtOffsetItr.hasNext())
      {
        LookupHit lh = (LookupHit) lhAtOffsetItr.next();
        neBegin = lh.getStartOffset();
        neEnd = lh.getEndOffset();

        //MetaDataHit mdh = lh.getGazMetaDataHit();
        MetaDataHit mdh = lh.getDictMetaDataHit();
       
        OntologyConcept oc = new OntologyConcept(jcas);
        oc.setCode(mdh.getMetaFieldValue(iv_props.getProperty(CODE_MF_PRP_KEY)));
        oc.setCodingScheme(iv_props.getProperty(CODING_SCHEME_PRP_KEY));
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      Iterator lhAtOffsetItr = hitsAtOffsetCol.iterator();
      int neBegin = -1;
      int neEnd = -1;
      while (lhAtOffsetItr.hasNext())
      {
        LookupHit lh = (LookupHit) lhAtOffsetItr.next();

        neBegin = lh.getStartOffset();
        neEnd = lh.getEndOffset();
        MetaDataHit metaData = lh.getDictMetaDataHit();
       
        addLocation(jcas, metaData, neBegin, neEnd);
      }
    }
  }
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      Iterator lhAtOffsetItr = hitsAtOffsetCol.iterator();
      int neBegin = -1;
      int neEnd = -1;
      while (lhAtOffsetItr.hasNext())
      {
        LookupHit lh = (LookupHit) lhAtOffsetItr.next();
        neBegin = lh.getStartOffset();
        neEnd = lh.getEndOffset();
        //MetaDataHit mdh = lh.getGazMetaDataHit();
        MetaDataHit mdh = lh.getDictMetaDataHit();

        OntologyConcept oc = new OntologyConcept(jcas);
        oc.setCode(mdh.getMetaFieldValue(iv_props.getProperty(CODE_MF_PRP_KEY)));
        oc.setCodingScheme(iv_props.getProperty(CODING_SCHEME_PRP_KEY));
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      Iterator lhAtOffsetItr = hitsAtOffsetCol.iterator();
      int neBegin = -1;
      int neEnd = -1;
      while (lhAtOffsetItr.hasNext())
      {
        LookupHit lh = (LookupHit) lhAtOffsetItr.next();
        neBegin = lh.getStartOffset();
        neEnd = lh.getEndOffset();
        //MetaDataHit mdh = lh.getGazMetaDataHit();
        MetaDataHit mdh = lh.getDictMetaDataHit();

        OntologyConcept oc = new OntologyConcept(jcas);
        oc.setCode(mdh.getMetaFieldValue(iv_props.getProperty(CODE_MF_PRP_KEY)));
        oc.setCodingScheme(iv_props.getProperty(CODING_SCHEME_PRP_KEY));
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    public void consumeHits(JCas jcas, Iterator lookupHitItr)
            throws AnalysisEngineProcessException
    {
        while (lookupHitItr.hasNext())
        {
            LookupHit lh = (LookupHit) lookupHitItr.next();
            int begin = lh.getStartOffset();
            int end = lh.getEndOffset();
            String coveredText = jcas.getDocumentText().substring(begin, end);           
            iv_logger.info("LookupHit offsets=("+begin+","+end+")\tcoveredText="+coveredText);
           
            MetaDataHit mdh = lh.getDictMetaDataHit();
            Iterator nameItr = mdh.getMetaFieldNames().iterator();
            while (nameItr.hasNext())
            {
                String mfName = (String)nameItr.next();
                String mfValue = mdh.getMetaFieldValue(mfName);
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   }

   static protected Map<LookupHitKey, Set<LookupHit>> createLookupHitMap( final Iterator<LookupHit> lookupHitIterator ) {
      final Map<LookupHitKey, Set<LookupHit>> lookupHitMap = new HashMap<LookupHitKey, Set<LookupHit>>();
      while ( lookupHitIterator.hasNext() ) {
         final LookupHit lookupHit = lookupHitIterator.next();
         final LookupHitKey key = new LookupHitKey( lookupHit );
         Set<LookupHit> lookupHits = lookupHitMap.get( key );
         if ( lookupHits == null ) {
            lookupHits = new HashSet<LookupHit>();
            lookupHitMap.put( key, lookupHits );
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            {
                Iterator<MetaDataHit> mdhMatchItr = mdhCol.iterator();
                while (mdhMatchItr.hasNext())
                {
                    MetaDataHit mdh = mdhMatchItr.next();
                    LookupHit lh = new LookupHit(mdh, lt.getStartOffset(), lt
                            .getEndOffset());
                    lhList.add(lh);
                }
            }
        }
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               final Set<MetaDataHit> mdhSet = namedMetaDataHits.get( fullPhrase );
               if ( mdhSet == null ) {
                  continue;
               }
               for ( MetaDataHit mdh : mdhSet ) {
                  final LookupHit lh = new LookupHit( mdh, startOffset, endOffset );
                  lookupHits.add( lh );
               }
            }
         }
      }
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Related Classes of org.apache.ctakes.dictionary.lookup.vo.LookupHit

  • org.apache.ctakes.dictionary.lookup.ae.AssertionCuePhraseConsumerImpl
  • org.apache.ctakes.dictionary.lookup.ae.BaseLookupConsumerImpl
  • org.apache.ctakes.dictionary.lookup.ae.DebugConsumerImpl
  • org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
  • org.apache.ctakes.dictionary.lookup.ae.NamedEntityLookupConsumerImpl
  • org.apache.ctakes.dictionary.lookup.ae.OrangeBookFilterConsumerImpl
  • org.apache.ctakes.dictionary.lookup.ae.UmlsToSnomedConsumerImpl
  • org.apache.ctakes.dictionary.lookup.algorithms.DirectPassThroughImpl
  • org.apache.ctakes.dictionary.lookup.algorithms.FirstTokenPermutationImpl
  • org.apache.ctakes.padtermspotter.impl.PADLocationConsumerImpl
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